Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi19g00016 ATGGACATGGATACTGACGATGATGTTTCCATGAACCCAAACATACCTAGATTGCAGGGTTTGGAGGAACTATCTTTTCATTATGTATTGTATGAGGAGAATGATGAAGGTGATGGACATGTCCACATGCATGAGGATGACAGTACTGGTGACTGTTATACATCCAACAATTCAGGGTCAGGCAATGAGGCATCAACTGATGATGTTCATTATGACTCGGATGGCAATTTCAGTCAAGGAGATAGGCATGACATGGGTGATGGACTAGGGGTCCTATTCAATGAGGACGCAGTTCTTATTGATTTTGTTCAACAAATCCGTGAGTTAGATCTTCGAATATTATGTCCAGTTAATGCGACTAATTTTCTATTTGCCTCATTAAGTGTAGCATGGTTTGTTTATAAGATGTATGGAAGGTCAAATGGATTTGCTATTCGTAATAGTTCAAAGCTTAGAAACAACACAGGAGAGGTCACACAACAAACTTTCTTGTGTAACCGTCAAGGGTTTAGAGAGGATAGGGGTTTGACGGAGGAGCAAAGGAAACAAGAACAAAAAGCACATACTCGATGTGAATGTAGAGCTTTATTCCGAGTTTCACATTGA 606 0.3993 MDMDTDDDVSMNPNIPRLQGLEELSFHYVLYEENDEGDGHVHMHEDDSTGDCYTSNNSGSGNEASTDDVHYDSDGNFSQGDRHDMGDGLGVLFNEDAVLIDFVQQIRELDLRILCPVNATNFLFASLSVAWFVYKMYGRSNGFAIRNSSKLRNNTGEVTQQTFLCNRQGFREDRGLTEEQRKQEQKAHTRCECRALFRVSH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi19g00016 201 MobiDBLite consensus disorder prediction 50 66 - -
Sebi19g00016 201 MobiDBLite consensus disorder prediction 37 67 - -
Sebi19g00016 201 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 200 - -
Sebi19g00016 201 Pfam FAR1 DNA-binding domain 134 199 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi19g00016 Sebi-Chr19 696384 698475 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi19g00016 FAR1 1.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi19g00016 - K17604 tpra:123913749 104.375