Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi199g00116 ATGCCTGCTGAGAACTCGAACTCGAACAGTTGGGAAGGGGAAGTGGAAGCGTTTGTTGAAGTTGATCCAACGGGGAGGTTTGGGCGTTACAGTGATCTGCTTGGGTTTGGAGCTGTGAAGAAGGTTTATAGGGCGTTTGATCAAGAGGAAGGTATTGAGGTGGCATGGAATCAGGTTCGTCTCAGGAATTTCAGTGAAGACCCTGTTCTCATAAACCGCCTTCATTCTGAGGTTGAGTTGCTCAGAACACTCTGCAACAAGTATATCATTGTGTGTTACAGTGTTTGGAAAGATAATGACCGTGGCAATATCAATTTTATTACTGAGGTCTGCACTTCTGGGAATCTTAGGGATTACAGGAAGAAGCACCGCCATGTCTCCATTAAGGCATTCAAGAAATGGTCTAAACAAGTCCTTGAGGGGTTAGAGTATCTTCATACACATGACCCCTGCATTATTCACAGAGATCTCAATTGCAGTAACATCTTTGTTAATGGGAACATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCTGCAATAGTGGGAAGGAGCCATGCAGCACATTCAATTTTAGGGACACCGGAGTATATGGCACCAGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATATTCTTTTGGAATGTGCTTGCTTGAAATGGTTACAATGGAGATACCCTACAGTGAATGTGACAGTGTCGCCAAGATATACAAAAAGGTCACAATGGGAATTAAGCCTCAGTCCTTGAGCAAAGTCACAGATCCAGAAGTGAAGGCGTTCATTGAGAAATGCATAGCACAACCAAGAGCAAGACCTTCAGCCACGGATCTTCTTAAGGATCCTTTCTTTTATGAACTCAACAATGATGAAGAATCAACGCTACTCACTTGA 900 0.4356 MPAENSNSNSWEGEVEAFVEVDPTGRFGRYSDLLGFGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLINRLHSEVELLRTLCNKYIIVCYSVWKDNDRGNINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIKPQSLSKVTDPEVKAFIEKCIAQPRARPSATDLLKDPFFYELNNDEESTLLT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi199g00116 299 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Sebi199g00116 299 FunFam probable serine/threonine-protein kinase WNK9 111 292 - -
Sebi199g00116 299 CDD STKc_WNK 26 286 - -
Sebi199g00116 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 289 - -
Sebi199g00116 299 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Sebi199g00116 299 SUPERFAMILY Protein kinase-like (PK-like) 21 286 IPR011009 -
Sebi199g00116 299 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Sebi199g00116 299 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi199g00116 299 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi199g00116 Sebi-Chr199 1372995 1374202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi199g00116 3 286 MAP Kinase Kinase Kinase AT5G55560 75.000 5.55e-168 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi199g00116 Pkinase 4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi199g00116 K08867 - gmx:100798280 568.54