Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi199g00108 ATGGCTATGGTGCCTTCGCATTTCCATTCAATTAAATCTCTGTGTGGGCTCCGACAAAATTGGAGGTTGAGGGTGAAATTGGTTAGGGTGTGGAACATGGCTTCCATAGCTACTCCAAATGACCCATTTGCCACCCAAATGGTTTTGATTGATGAAGAGGGTGGAAGAATTGAGGCCACTGTACCCAAACAACATATGCCTAAGTTCTCTCACTCTCTCATTGAGGGACAGATATACAAGATCACTAATTTTGGAATCCTGCGAAACAACGGAAAGTTTAGAGAAGTTGTCCATGAGTTTAAGATCATATTCAATACCACTACCAGGCTCATTCCGTGCCAGAATGTTTCAATCTTATCATGTGGTTTTGCATTTGTGAAGAGTGATTTGATAAAGAAAACCAATGGTCGATCTGAATACCAAATAGATTTCATGGGCATCGTCACTGCCGTTTCAGAGGAAATCAACTTGAGCAAGGAGGGCAGGGAGACACGGCTCATGCTAATTGATTTAGTGGATGAGATGGGACAAATACGATTGACTTTATTTGGAGAAATGATTGATGTGGTTGCTGGATATCTTGGTCTCCCTCGATGTGGCTTGCCTGTTCTTATAATACAATTAGCCAAGGTTAATCTTTACAAAGGGGAAGTTGGGATCCAGAATGTGATGAACGCGTCAAAGGTTTATTGGAACCCGGATATGCCTGAGGTTGTAGAGTTTAGGAATGGTTTAGCTGTTCACGAGATTGAAACTGATGTGGACATTCGAACTATATCTGAAACGAGGCGCCCTGCTTCAATGAAAGATGATTTCCTTAAATTATATCCAAAAAGGACTCTGGAACAACTGCACCAAATGGAAGAGGATGGCTTCTTTGTAATTATGGGCACAGTTGAACAGGTTATCGAAGATGGATTTTGGTGGTTCAAGCTGAAAATTGAGGTCTCTGATGCAACAGACACTGCTCAGCTGATTTTGTTTGACTCAGAGTGCTATGCAATGCATCACAAGTCCTGTCGTGACATGTTAGCTGAGATTAAGTTGAAGTTTGCTCCTTCATTTACCAAAATTATTAATGAGGAAGCGACCAACTGTGTGAAGGACATAACCCCTGAATTGTCTTCTGTTGTGACTGAGATTCAAGTTAGCCCTTTTACAACTATTCCGTCGCCCAGTGATGGGGATGATGGTGGTAGTGTTAACAAGAGGGAGGCACAACAATCAACGGATGGACAATATGAGAGGAAGAAATGTCCCAGGCAGAAAGTGATCAAGGTTGAAAAGAATTGA 1293 0.4192 MAMVPSHFHSIKSLCGLRQNWRLRVKLVRVWNMASIATPNDPFATQMVLIDEEGGRIEATVPKQHMPKFSHSLIEGQIYKITNFGILRNNGKFREVVHEFKIIFNTTTRLIPCQNVSILSCGFAFVKSDLIKKTNGRSEYQIDFMGIVTAVSEEINLSKEGRETRLMLIDLVDEMGQIRLTLFGEMIDVVAGYLGLPRCGLPVLIIQLAKVNLYKGEVGIQNVMNASKVYWNPDMPEVVEFRNGLAVHEIETDVDIRTISETRRPASMKDDFLKLYPKRTLEQLHQMEEDGFFVIMGTVEQVIEDGFWWFKLKIEVSDATDTAQLILFDSECYAMHHKSCRDMLAEIKLKFAPSFTKIINEEATNCVKDITPELSSVVTEIQVSPFTTIPSPSDGDDGGSVNKREAQQSTDGQYERKKCPRQKVIKVEKN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi199g00108 430 Gene3D - 8 115 IPR012340 -
Sebi199g00108 430 MobiDBLite consensus disorder prediction 386 420 - -
Sebi199g00108 430 Pfam Domain of unknown function DUF223 47 134 IPR003871 -
Sebi199g00108 430 CDD RPA1_DBD_A_like 22 109 - -
Sebi199g00108 430 SUPERFAMILY Nucleic acid-binding proteins 7 117 IPR012340 -
Sebi199g00108 430 CDD RPA1_DBD_B_like 143 242 - -
Sebi199g00108 430 Gene3D - 118 252 IPR012340 -
Sebi199g00108 430 SUPERFAMILY Nucleic acid-binding proteins 134 247 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi199g00108 Sebi-Chr199 1288811 1291353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi199g00108 4 318 Core DNA Replication Machinery Family AT2G06510 22.866 2.68e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi199g00108 - - adu:110276578 235.728