Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi199g00101 ATGTCCTCAGCTGGTGGGGATGATGATCTTGGTGCTAGCTTAATCCTCACAAGCAAGATTGATGTTGCTCGAATTGTGAAGGAGCAGGACTTTGAATCGCTTCTTGAGATTGGTGGGGTTGACCGCGTTTGTGCTATTCTCCAGAGTCAACGTCAACACTCAGAGATTGATTATAGGAACCTTGGTGTGTTGGGGAACCCTGTACCAGTTTATGGAACAAGCTTCTCCAGCTTTTTGTTGAATAGCTGGAAACAGAATCGTTACACAATTTCAATGCTGTTGATCTCAGCTGCATTCTCCTTTGCCACTGAGTTCAAGCAAGAGGGGCCCAAATATGGTTGGCATGATGGTGTTGCCATTGTTTCTGCTGTTCTTATGCTGATTGTGTTCTCTTCAATGACTAACTTTTGGCGTCAAAGACAAATGATGAAATTGGCTAAGAGAAGGGGCAAGTTGGAATTCACAGTTCAAAGAGATGGAGAGTGCACAAAGGTTGCCTTATCAGATATTGTGGTGGGTGACATGGTGTGTTTGAGGAAGGGTGATGAGGTTCCAGCAGATGGTTTGCTAGTAAGTGGTGAGTCTGGTGACATCCTTGTGCTAGCTGAGGCAATGAAAAGCAAAATTGATTGTAAGAGGAACCCATTTCTTATGGCTGGTTCAAAGGTGATTGAGGGTAATGGACGGATGCTTGTAGCAGCATCAGTTGCATACAAAGATTGTAATAATCCTGAAAAGAGAGGCCTATTGGAGAGTCAAATTGAGAAGCCAATTTCTTACATTGACAAAGCAGCACTTTTTATCTCTACACTGGTTGCACTTGTGGTATTCATTCGCCTAATGTGTAAAAAGAATGTGGATAGTGGTGGGTTGCCAGAAATGAAGGGGAATGTCTCAGTTGGCTTAGTAATGGAAGTCCTTGAGAGAATCTTTTTGAGACCACAAGGAAGGATTTCCATTTTAACAGGTCTTGTAACTGTTGTAATACTATGTGTGCAACATGGGGTGCCACTTATGGTTACAATTTCTCTCAAATACCAGATTGATAAGGTAGTGTCAGACCAAGAGGCAGTTCTTAATGATTTATCAGCTTGTACTACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCAGGTGGGCTTATATCTAAACCAATGGAGGTTAGCAGAATCTGGATGGGGGAGACAGATATTAGCAAGGTTGAGGGATCAAAATCAGATCCAGAAACAACATGGGAAATGAACATAAAATCTCTCACACAAGAATATGACATTCTTAAGCACAGAAAACTGAATTCTGACAAAGAAGGAAGGGGAGTTTTGGTGAGAAAATTTGAGGGCAATGGACAAGTTCTGCACTTGCACTGGAGTGGGACTGCATCCACAATATTGGATATGTGTTCACAATACTATGATAGTAAAGGAGAATGCCATGCCATGAAAAACCAGAAAATCAAATTTGGGCAGGTGATTAAAGACATGGAGGACAGTGGCCTTGAACCAATTGCATTTGCTTATAGACAAACACATGAAGAAGAACTTGAGCAAGATGAATTGATCTTGTTAGGACTAATAGGTCTCAAATACACATGTCAGGAACCAACAAAGTTAGCTTTGGAAAACCTCAGAAATACTGGAATACAGATCAAGTTGGTCTCAGAGAATGACATCATGTTAGTGAAAGACATAGCTTCTGAACTGGGAATAGATGTGACAGTAGATGGTATTATGCTTGAAGGAAAAGAATTTCAAGATTTGAATGGCAATGTTAGATCAGACAAAGTGGATCCAGCCCTTGTAATGGGAAGTTTCCGTCCTGAAGACAAGCTTCTCATGGTACAATGCTTGCAAGACAAAGGTCATGTGGTTGCATTTGTTGGAAGAAGGTTGAGCCATACTTCAGTTCTAAAGGTAGCTGATGTAGGGATAGTTCATAACTCTAAGAGCAGAATAGTGGATAGAGAGAGTGCTGGTATATCTATCAAGTGTTTCAGTGCATTGAAACCAATTGTGAGGGCTGGAAGAAGTAACTATCACAATATTCAGAAGTTCATTCAACTTCAGCTGACATTTACCATATCAGGGTCACTCATAACCTTGATTACAACAATATTCACTGGAGAATCCCCTCTAACAGCAATCCAATTGATTTGGGTGAATGTACTAATGTGCCTTCTGGGTAGCCTAATGATGGTAATGGAGTTAAGTAGCCAGGAAGAGCTTGACAAGAAACCATCAGACAGGAATCAGCCAATCACAACCAAGGTGTTGGTGATTGAGTATGCAAAAGGCCTAGCAGATTGCATGAGGCTGAATGCTACTCAATGGGCTATCTGTGTCCTGTTTGGTGCTCTTCCATGGGTATTTGAATGGGCCTTGAAGATTCTTCCACCTATTCTCAGCACCAATTGTGCTTCAGAATCAAATACTTCAACCACCCTACAAAATTGGTTCTATCATTCTTGGAGTTTTCCATCTATGATGCTCCTTTTGTTCCCTGTAGGACTAATATAA 2517 0.412 MSSAGGDDDLGASLILTSKIDVARIVKEQDFESLLEIGGVDRVCAILQSQRQHSEIDYRNLGVLGNPVPVYGTSFSSFLLNSWKQNRYTISMLLISAAFSFATEFKQEGPKYGWHDGVAIVSAVLMLIVFSSMTNFWRQRQMMKLAKRRGKLEFTVQRDGECTKVALSDIVVGDMVCLRKGDEVPADGLLVSGESGDILVLAEAMKSKIDCKRNPFLMAGSKVIEGNGRMLVAASVAYKDCNNPEKRGLLESQIEKPISYIDKAALFISTLVALVVFIRLMCKKNVDSGGLPEMKGNVSVGLVMEVLERIFLRPQGRISILTGLVTVVILCVQHGVPLMVTISLKYQIDKVVSDQEAVLNDLSACTTMGLVTVICIDVSGGLISKPMEVSRIWMGETDISKVEGSKSDPETTWEMNIKSLTQEYDILKHRKLNSDKEGRGVLVRKFEGNGQVLHLHWSGTASTILDMCSQYYDSKGECHAMKNQKIKFGQVIKDMEDSGLEPIAFAYRQTHEEELEQDELILLGLIGLKYTCQEPTKLALENLRNTGIQIKLVSENDIMLVKDIASELGIDVTVDGIMLEGKEFQDLNGNVRSDKVDPALVMGSFRPEDKLLMVQCLQDKGHVVAFVGRRLSHTSVLKVADVGIVHNSKSRIVDRESAGISIKCFSALKPIVRAGRSNYHNIQKFIQLQLTFTISGSLITLITTIFTGESPLTAIQLIWVNVLMCLLGSLMMVMELSSQEELDKKPSDRNQPITTKVLVIEYAKGLADCMRLNATQWAICVLFGALPWVFEWALKILPPILSTNCASESNTSTTLQNWFYHSWSFPSMMLLLFPVGLI 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi199g00101 838 SUPERFAMILY Calcium ATPase, transduction domain A 154 234 IPR008250 -
Sebi199g00101 838 Gene3D - 525 665 IPR023214 -
Sebi199g00101 838 PANTHER CATION TRANSPORTING ATPASE 411 758 - -
Sebi199g00101 838 Pfam E1-E2 ATPase 154 237 - -
Sebi199g00101 838 Gene3D - 389 524 IPR023299 GO:0000166
Sebi199g00101 838 Pfam Cation transporting ATPase, C-terminus 710 761 IPR006068 -
Sebi199g00101 838 SUPERFAMILY HAD-like 373 729 IPR036412 -
Sebi199g00101 838 Gene3D - 235 388 - -
Sebi199g00101 838 Gene3D - 129 234 - -
Sebi199g00101 838 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 798 IPR023298 -
Sebi199g00101 838 Gene3D - 666 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi199g00101 Sebi-Chr199 1233420 1236755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi199g00101 25 758 Primary Pumps ATPases AT3G63380 32.878 8.29e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi199g00101 K01537 - gmx:102661547 800.045