Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi199g00096 ATGGAGTACCTTTTTGGCTTTGCGTCTTCCATTTCAAGAGACTTGGTATGTGGAGCAGTAGATCAATTAAGATACCCTTGCTGCTTCAATAATTTTGTTGAAGACCTTGCAAAAGAAAAGGCCAATTTGGTCACAACAAGAGATAGTGTCCAAGACCGTGTTGCACATGCCAAGAAACAAACTAGAAAGACCGCTCTAGTTGTTGATAAGTGGTTGAATGATGCTAACACTGACATAGACAAAGTTAATAAGTTACTAGAAAAGGCAACAACAAAAGGAAAAAATAGTTCTTGTCTTGTACACTGTCCAAATTGGATTTGGAGATACAATCTGGGAAGGAAGTTGGCAAAGAAGAAATGTGACATTAAAACGTGCATTCAAGAAGGTAGACAGTATATACAACTTGAATACCCTGCTTCACTTAGAGGCTATTTTTCTTCTGAAAAATGTTGGGAATTTGATAGCAGAAAATCTGCTTGTGAGGAGCTTATGAATGCATTGAAAGATGATGAGGTTACCATGATTGGATTGTATGGAATGGGGGGTTGTGGGAAAACAATGTTGGCAATGGAAGTAATGAAGAGAGCAAGTCATCTCTTTGAACAAGTGCTTTTTGTGCCTGTCCCTAATAATGCTGAAGTGCAGAGGATCCAAGAAAAAATTGCAAGCTCTCTTGAATTTGAATTCCAAGAAAAACATGAAATGGATAGATCCCAACGCTTGTGCATGAGGTTGACTCAAGAAGATAGGATCCTTGTGATTCTGGATGATGTGTGGGAAATGCTTGATTTTGATGCCATAGGGATTCCTTCTAAGGAACACCATAAAGGTTGCAAGGTTCTTATTACCACTCGATCTGAAACCATGTGTGTTTCCATGAACTGCCAAAAAATGATTCACCTATCAACCTTAACCAATGATGAAACGTGGGAAATTTTCCAAAAGCATGCACTCATATCAGAGGGCACTTCCTTTAGTGTAAAGCATTTGGCAAGAGAAATTTCTAATGAATGTAAAGGACTTCCTGTTGCCATTGTAGCTGTAGCTAGCAGTTTGAAAGGCAAGGCTGAGGTGGAATGGAAGGTTGCATTGAATAGATTGAGAAGTTCCAAACCAGTGAATATTGAAAAAGGTTTGCAAAATCCTTACAAGTGCTTGCAGTTAAGCTATGATAATTTGGACATGGAAGAAGCCAAGGCACTTTTCTTCTTGTGTTCTGCATTTCCTGAAGATTATGAAATTCCAGTTGAAATTTTAACCAGATCTGCAATAGGGCTAGGCATAGTTGGAGAAGTTCAATCATATGAAGAGGCAAGGAATGAAGTCAGTGCAGCTCAAAATAAGCTCATAAGTTGTTGCTTGTTGTTAGATGTTGATGACAGAAAGTGTGTCAAAATGCATGACTTAGTTCGCAATGTAGCCCACTAG 1428 0.3873 MEYLFGFASSISRDLVCGAVDQLRYPCCFNNFVEDLAKEKANLVTTRDSVQDRVAHAKKQTRKTALVVDKWLNDANTDIDKVNKLLEKATTKGKNSSCLVHCPNWIWRYNLGRKLAKKKCDIKTCIQEGRQYIQLEYPASLRGYFSSEKCWEFDSRKSACEELMNALKDDEVTMIGLYGMGGCGKTMLAMEVMKRASHLFEQVLFVPVPNNAEVQRIQEKIASSLEFEFQEKHEMDRSQRLCMRLTQEDRILVILDDVWEMLDFDAIGIPSKEHHKGCKVLITTRSETMCVSMNCQKMIHLSTLTNDETWEIFQKHALISEGTSFSVKHLAREISNECKGLPVAIVAVASSLKGKAEVEWKVALNRLRSSKPVNIEKGLQNPYKCLQLSYDNLDMEEAKALFFLCSAFPEDYEIPVEILTRSAIGLGIVGEVQSYEEARNEVSAAQNKLISCCLLLDVDDRKCVKMHDLVRNVAH 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi199g00096 475 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 475 - -
Sebi199g00096 475 PRINTS Disease resistance protein signature 245 259 - -
Sebi199g00096 475 PRINTS Disease resistance protein signature 174 189 - -
Sebi199g00096 475 PRINTS Disease resistance protein signature 338 352 - -
Sebi199g00096 475 Coils Coil 33 53 - -
Sebi199g00096 475 Gene3D - 144 300 IPR027417 -
Sebi199g00096 475 FunFam Probable disease resistance protein At1g61300 153 298 - -
Sebi199g00096 475 Coils Coil 72 92 - -
Sebi199g00096 475 Gene3D - 303 388 IPR042197 -
Sebi199g00096 475 Gene3D - 389 475 IPR036388 -
Sebi199g00096 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 403 IPR027417 -
Sebi199g00096 475 Pfam NB-ARC domain 158 392 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi199g00096 Sebi-Chr199 1172963 1174390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi199g00096 171 386 WRKY Transcription Factor Family AT5G45050 22.707 6.54e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi199g00096 - - cam:101501248 759.214