Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi199g00084 | ATGCAATCCAAATCTGAAACTGCAAATCAACTGGGGTCTAATCCACATTCCTTTACGCCTGGCAGTGTTTATTCTGAACCCTGGTGGCGTGGTGTTGGGTACAATCCTGTCTCCCAAGCAATGTCAGGGGCAAATGGATCCAATTCATCATCGCTTGAATGCCCTAATGGTGATTCAGAATCAAGTGAAGGCCAATCTTTGTCCAATAATGGGCTGAATGAAGAAGATGATGATGCTAATAAAGAATCACAACCTGCTGCTCCTAATCAATCAGGGAATTACGGACAAGAACACCAAGGGATGCAACATGGTTCATCATCTGCACCTTCTGTGCGTGATGGATGTCTTGCGCAGGCTCCACAACTGGAACTTGTTGGTCATTCAATTGCATGTGCTTCAAATCCTTATCAGGATCCATACTATGGGGGCATGATGGCAGCATATGCACACCAGCAGTTGGGATATGCTCCTATAGGAGCGCCTCATGCCAGAATGGCTTTGCCCCTTGAGATGGCTCAAGAGCCTGTTTATGTGAATGCCAAACAATACCAAGGAATTCTGAGACGAAGACAGGCTCGTGCTAAAGCAGAGCTTGAAAGGAAGTTGATAAAAGTCAGAAAGCCATATCTTCATGAATCTCGGCATCAGCATGCTATGAGAAGAGCAAGGGGAAGTGGAGGACGTTTTGCAAAGAAAACTGAAGTTGAGAGCAAGGAAAGGGATATGGGTAGTGGTTCAGTTCCATCAGCACAGTCAATTAGTTCATCTGGTTCTGAAGCTTTACCCTCTGACTCTGCTGAGACCCGGAATTCTCCAAGTGTGCAACCAAATGCAAGAGGATCTAAAGTGAATGAGAGATTTCAAGAACTCAACTATGCAAGTGGTAGTAACTCCTACCATAATCATAATGGTTTACAAATGGCTTCAACATTTTGTTTGCACTCAGGTGAAAGAGTAGAAGAAGGGGACTGTTCAGGTCAGCAACGGGGGAGCATCTCATCTGAGCACACAACACAGAGGCGTCTTGCTATTCAGTAA | 1038 | 0.4509 | MQSKSETANQLGSNPHSFTPGSVYSEPWWRGVGYNPVSQAMSGANGSNSSSLECPNGDSESSEGQSLSNNGLNEEDDDANKESQPAAPNQSGNYGQEHQGMQHGSSSAPSVRDGCLAQAPQLELVGHSIACASNPYQDPYYGGMMAAYAHQQLGYAPIGAPHARMALPLEMAQEPVYVNAKQYQGILRRRQARAKAELERKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKTEVESKERDMGSGSVPSAQSISSSGSEALPSDSAETRNSPSVQPNARGSKVNERFQELNYASGSNSYHNHNGLQMASTFCLHSGERVEEGDCSGQQRGSISSEHTTQRRLAIQ | 345 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi199g00084 | 345 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 177 | 197 | IPR018362 | GO:0003677|GO:0016602 | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 83 | 112 | - | - | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 211 | 226 | - | - | |
Sebi199g00084 | 345 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 174 | 229 | IPR001289 | GO:0003700|GO:0006355 | |
Sebi199g00084 | 345 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 15 | 288 | IPR001289 | GO:0003700|GO:0006355 | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 318 | 345 | - | - | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Sebi199g00084 | 345 | Gene3D | - | 172 | 234 | - | - | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 211 | 283 | - | - | |
Sebi199g00084 | 345 | ProSiteProfiles | NF-YA/HAP2 family profile. | 172 | 232 | IPR001289 | GO:0003700|GO:0006355 | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 1 | 112 | - | - | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 244 | 283 | - | - | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 326 | 345 | - | - | |
Sebi199g00084 | 345 | SMART | cbf3 | 171 | 232 | IPR001289 | GO:0003700|GO:0006355 | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 38 | 73 | - | - | |
Sebi199g00084 | 345 | MobiDBLite | consensus disorder prediction | 227 | 241 | - | - | |
Sebi199g00084 | 345 | PRINTS | CCAAT-binding transcription factor subunit B signature | 206 | 229 | IPR001289 | GO:0003700|GO:0006355 | |
Sebi199g00084 | 345 | PRINTS | CCAAT-binding transcription factor subunit B signature | 175 | 197 | IPR001289 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi199g00084 | Sebi-Chr199 | 981305 | 983465 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi199g00084 | 1 | 271 | CCAAT-HAP2 Transcription Factor Family | AT5G12840 | 56.475 | 4.44e-88 | 264 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YA | Sebi199g00084 | CBFB_NFYA | 1.6e-26 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi199g00084 | K08064 | - | gmx:100808378 | 506.908 |