Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi199g00075 ATGCCGAGAACCCTAAATTCTATGCTCCTCGCCGGCGCCGGCGGGACACTCCGTTTCTCCTCCGAAGACTGCTCCATTTCCGGCAGGTTTTTCCGGCCTCCGATTGTAGATTCCGGCAACCGGTGTAGCACTTCGATCCGAGCTTTCACTGCGACGGCGTCGGCGATCGATTCGCGGCGGCCGGCGAGCCTGTACGAGGTGCTACGGATCAAGCAGAACGCGTCGGCGGTGGAAATCAAGTCGGCATACCGGAGCCTTGCGAAGGTTTACCACCCTGATTCGGCGGTCCGGCGATCGGAATGCGACGAAAGGGACTTCATCGAGATCCATGACGCGTACGAGACACTGTCGAATCCGTCGACCAGAGCGCTCTATGATCTCTCGTTGATGGCCGCGACGCACAGTGGGAGGAACTCGTTCTCGTCTTCGGTGGCTCCGAATGACTATTCCGGATTCTACACGACCCGGAGATGGGAAACGGATCAATGCTGGTAG 495 0.5879 MPRTLNSMLLAGAGGTLRFSSEDCSISGRFFRPPIVDSGNRCSTSIRAFTATASAIDSRRPASLYEVLRIKQNASAVEIKSAYRSLAKVYHPDSAVRRSECDERDFIEIHDAYETLSNPSTRALYDLSLMAATHSGRNSFSSSVAPNDYSGFYTTRRWETDQCW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi199g00075 164 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 38 164 - -
Sebi199g00075 164 SUPERFAMILY Chaperone J-domain 63 136 IPR036869 -
Sebi199g00075 164 Pfam DnaJ domain 64 126 IPR001623 -
Sebi199g00075 164 CDD DnaJ 65 118 IPR001623 -
Sebi199g00075 164 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Sebi199g00075 164 SMART dnaj_3 62 121 IPR001623 -
Sebi199g00075 164 ProSiteProfiles dnaJ domain profile. 63 129 IPR001623 -
Sebi199g00075 164 Gene3D DnaJ domain 50 147 IPR036869 -
Sebi199g00075 164 PRINTS DnaJ domain signature 83 98 IPR001623 -
Sebi199g00075 164 PRINTS DnaJ domain signature 65 83 IPR001623 -
Sebi199g00075 164 PRINTS DnaJ domain signature 101 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi199g00075 Sebi-Chr199 907322 907816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi199g00075 65 126 C2H2 Transcription Factor Family AT1G74250 43.939 3.92e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi199g00075 - - gmx:100786034 188.734