Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi199g00023 ATGGTGTATTTATATGTAGGCCTTTTGGAGGGGGAAGAAAATTCTTTAGGAAACTACAGTTACACCGTGAATCAGGTGGTGCAACCAACTTATTATGTAACTCCCCAAGGCTATACTCGCTCGCCTGCACGTGAGAGAGCTCTGCCAGTTACCAATGTGGTAAGAATCATGCGGCAAGTTCTTCCACCACAAGCAAAGATCACTGATGAGTGTAAGGAAGCAATGGTTGAATGTGCAGCTAATTTCATCACCTTCATCACTAAAGAGGCTAGCCGCCAATGCAAACTTGAGCACCGTAAAACTATCATTGCTGAAGATGTGGTGTGTAATATGGGGAAGTTAGGTTTTGATAACTATGCTGAGGTTTGCAATCGCTTCCTCCAACGCTATCGTCAGAATGCAGCTATTCCTTATGTTCCTACACAAGAATCGTCTATTATAGATGGTGTGCCACTGCTGCCACCAGCTTTTGATGCTCCTAGTTTCCCGGTTGGTCAATACCCATTTCCTGACTCAACAAAAATGGATGGATTTTACATCGATGAGTCAAGTGGGGGCGACTCAAGCAATGCCAATGTTCGCAATGATTCTTTTGCTTATTTCAATCCTGACGACAACATTGATAACTGA 630 0.4349 MVYLYVGLLEGEENSLGNYSYTVNQVVQPTYYVTPQGYTRSPARERALPVTNVVRIMRQVLPPQAKITDECKEAMVECAANFITFITKEASRQCKLEHRKTIIAEDVVCNMGKLGFDNYAEVCNRFLQRYRQNAAIPYVPTQESSIIDGVPLLPPAFDAPSFPVGQYPFPDSTKMDGFYIDESSGGDSSNANVRNDSFAYFNPDDNIDN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi199g00023 209 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 38 134 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sebi199g00023 209 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 47 107 IPR003958 -
Sebi199g00023 209 SUPERFAMILY Histone-fold 45 134 IPR009072 GO:0046982
Sebi199g00023 209 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Sebi199g00023 209 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Sebi199g00023 209 PRINTS CCAAT-binding transcription factor subunit A signature 113 131 - -
Sebi199g00023 209 MobiDBLite consensus disorder prediction 184 209 - -
Sebi199g00023 209 MobiDBLite consensus disorder prediction 184 199 - -
Sebi199g00023 209 Gene3D Histone, subunit A 39 143 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi199g00023 Sebi-Chr199 216518 217147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi199g00023 44 132 CCAAT-HAP3 Transcription Factor Family AT5G47670 51.685 5.50e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sebi199g00023 CBFD_NFYB_HMF 2.5e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi199g00023 K08065 - twl:119989291 124.405