Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi199g00011 ATGTTGTCTCTTTTGGTGGATTTAGCAGAAGGTGGCCATGGTGGTGTTAGGAATTACATTAGTTGGGAAGATTTGTTGGTAGATGGAAGTTTGGCCGTGAAGTCCAATAACGAGGTTCGAGTCATTGTGGTTGATCAACATGGCAAGGGACATTCCAAAACTGTTCAAGGAGCAGTGGATATGGTTCCAGATCATAACAGACAAAGGGTCAAAATATACATTTATCCAGGACTTTACAGTAAGTCATCTGACAGAGGTCCAAATGGCCAAGCATTAGGGACCTATGGTTCAGCAACTGTAGCAGTTGAATCAGATTATTTTTGTGCAACTGAGATCACTTTTGAGAACACAGTGGTTGCAGCACCTGGTGGAGAAGGAATGCAAGCAGTGGCACTGAGGGTAGACAGTAATAAAGCCATGTTCTATAGAGTTAAGATTAAGGGAACACAGGACACTCTCTTGGACAACACAGGAACCCATTACTACTACAGGTGTCTCATTCAAGGAAAAGTTGATTTTATCTTTGGCAGTGCTAAATCACTCTTTGAGAAGTGTCATCTTCAGTCAATAGCTGAGAACTATGGAGCAATTGCAGCACATCACAGGGATTCACCACATGAAGACACAGGCTTTTCTTTTGTAGGGTGTGGTATAAGAGGAACTGGTAGTGTGTACCTTGGTAGAGCATGGGGGAACTATTCAAGAATAATATACTCAAATTGTAATATGGAGGATATTATTAATCCTGAAGGATGGTCAGAATGGAATCATCCAGAAAGAAAGAAGACTGCAGTGTTTGGTGAGTACCAATGCCATGGAAGAGGGGCAGATAGAAGACATAGGGTGCCTTGGTCAAAATCATTCAGCTATGAGGAAGTAACGCCATTCCTGGACAAGAGCTTCATAAATGGAGATCAGTGGCTTAGACTGTAG 933 0.4223 MLSLLVDLAEGGHGGVRNYISWEDLLVDGSLAVKSNNEVRVIVVDQHGKGHSKTVQGAVDMVPDHNRQRVKIYIYPGLYSKSSDRGPNGQALGTYGSATVAVESDYFCATEITFENTVVAAPGGEGMQAVALRVDSNKAMFYRVKIKGTQDTLLDNTGTHYYYRCLIQGKVDFIFGSAKSLFEKCHLQSIAENYGAIAAHHRDSPHEDTGFSFVGCGIRGTGSVYLGRAWGNYSRIIYSNCNMEDIINPEGWSEWNHPERKKTAVFGEYQCHGRGADRRHRVPWSKSFSYEEVTPFLDKSFINGDQWLRL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi199g00011 310 SUPERFAMILY Pectin lyase-like 41 308 IPR011050 -
Sebi199g00011 310 FunFam Pectinesterase 80 310 - -
Sebi199g00011 310 Pfam Pectinesterase 91 305 IPR000070 GO:0030599|GO:0042545
Sebi199g00011 310 Gene3D - 36 82 IPR012334 -
Sebi199g00011 310 Gene3D - 83 310 IPR012334 -
Sebi199g00011 310 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi199g00011 Sebi-Chr199 102381 104114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi199g00011 8 262 Carbohydrate Esterase AT5G55590 53.922 2.37e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi199g00011 K01051 - gmx:100804220 482.641