Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00092 ATGTGTCATTTCCCAGGATGTATCAATTTGACAGGTGGCTTGCAGATGATTCTGGACAATGTTTCATGCGGAGATGGAAGCCAGATGAGGAAAGGATTTACTTGCCAACGATGTGTAACCAAACCTGGGAAAGCATGGTCGTATGTTAAGGAGGGCAAATTCAAGATAGCCCTTTATTATTATGATCGGAAGCAGATTAATTACACCAAGCTTGGGAAGATCATGAAATCTGAGAACCACACCGGTTCCAGATGTCTTGATTCTTCTGGGCCGAGTTTGGTTGATAGGATGAATGGGTCCTGCTCCGGTCCATATTCTGATCACCTATGGACTTCTGTGATATCTACTGCTCCATCGGTGAAGAGCCAACCCCTGGGTCTCCCGGTTTCCGTGGTTAAAGGTTTCTTGAAGAGGGATCAAGAGTTTCTATCTGTTGTACTGCCCAATGGCTCAACCCAGGACTGGTTGCTTATTTGGAACAAGAAACGCAAATATCAGGTGCATCTTGGTGCTGGATGGTACAAATTTTCAAAGGAAAATAATCTGAAGGTCGGGGACCAGCTGAATTTCAAGAAATATAATGAAGGAGATGTTGTTATGATTACGATTAGGCGTCGTTAA 621 0.438 MCHFPGCINLTGGLQMILDNVSCGDGSQMRKGFTCQRCVTKPGKAWSYVKEGKFKIALYYYDRKQINYTKLGKIMKSENHTGSRCLDSSGPSLVDRMNGSCSGPYSDHLWTSVISTAPSVKSQPLGLPVSVVKGFLKRDQEFLSVVLPNGSTQDWLLIWNKKRKYQVHLGAGWYKFSKENNLKVGDQLNFKKYNEGDVVMITIRRR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00092 206 Pfam B3 DNA binding domain 113 205 IPR003340 GO:0003677
Sebi198g00092 206 SUPERFAMILY DNA-binding pseudobarrel domain 117 204 IPR015300 -
Sebi198g00092 206 Gene3D - 87 206 IPR015300 -
Sebi198g00092 206 ProSiteProfiles B3 DNA-binding domain profile. 110 206 IPR003340 GO:0003677
Sebi198g00092 206 CDD B3_DNA 125 205 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi198g00092 Sebi-Chr198 1283929 1285498 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi198g00092 B3 1.9e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00092 - K06872 mtr:120577830 78.9517