Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00088 ATGCACGCCAAATCGGCACAATCATCATTTCGGGATCGGACGCAGGAATTCCATAGCATCGCGGAAAGGTTGAAGAAATCAACATCAGGATCAAATGGACCGAGCAGCAGTAGTGGTGCTAGTTCATCCAGATCGGAGGAACAACGATCTGCTGTTGCAATTCAATCAGAGTTCAATAAAAGGGCTTCCAAGATTGGCTATGGGATTCACCAAACATCTCAAAAGCTTGCTAAGCTCGCCAAGTTGGCAAAAAGAACTTCGGTTTTTGATGACCCTACCATGGAAATCCAAGAGCTTACAAGTGTTATTAAGCAAGATATTACTGCATTGAACTCTGCGGTTGTGGATCTTCAGCTACTCAGCAACTCTAGAAATGAGAGTGGAAATGTATCTGCCGACACAACTAGCCATTCGACCACGGTTGTGGATGACCTAAAGACCCGATTGATGAGCACAACAAAAGAGTTTAAAGATGTTCTCACCATGCGAACTGAGAACTTGAAAGTACATGAGAATAGAAGACAATTGTTTTCGTCCTCTGCTTCTAAAGAATCTGCAAATCCTTTTGTCCGTCAACGTCCATTAGCTACAAGGACAGCTGCTAGCGCTTCTAATGCCCCTGCACCCCCATGGGCTAGTGGGTCTCCGTCTTCATCTCAGTCGCTTCCTAAGAAGCAGGTGGATGGGGAGAGTCAACCATTGCTGCAACAGCAGCAGCAGGTAGTTCCATTGCAAGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGCTCAGCAACATCTTTAATCAACTAGCAACACTTGTTTCCCAACAAGGAGAGATTGCCATCAGTAATTCGTATTACTAA 873 0.4479 MHAKSAQSSFRDRTQEFHSIAERLKKSTSGSNGPSSSSGASSSRSEEQRSAVAIQSEFNKRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLLSNSRNESGNVSADTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSSSASKESANPFVRQRPLATRTAASASNAPAPPWASGSPSSSQSLPKKQVDGESQPLLQQQQQVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAISNSYY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00088 290 MobiDBLite consensus disorder prediction 197 237 - -
Sebi198g00088 290 MobiDBLite consensus disorder prediction 1 54 - -
Sebi198g00088 290 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 246 283 IPR000727 -
Sebi198g00088 290 SUPERFAMILY t-snare proteins 56 283 IPR010989 GO:0016020|GO:0016192
Sebi198g00088 290 MobiDBLite consensus disorder prediction 1 23 - -
Sebi198g00088 290 PANTHER SYNTAXIN 51 283 IPR045242 -
Sebi198g00088 290 MobiDBLite consensus disorder prediction 24 54 - -
Sebi198g00088 290 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Sebi198g00088 290 Gene3D - 53 286 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi198g00088 1 285 SNARE and Associated Proteins AT3G24350 61.783 2.73e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00088 K08490 - gmx:100811494 399.823