Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00079 ATGGGTGTGGATTACTATAATATATTGAAGGTGGATAGAAATGCTACCGAGGATGATTTGAAGAAAGCATATAGAAAATTGGCCATGAAATGGCACCCTGATAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAATTTCAAGCAGATCTCTGAGGCCTATGATGTGTTGAGTGATCCTCAGAAAAGGGCAATTTATGATCAACATGGAGAGGAAGGGTTGAAAGATAGGCCACCACCTGATAGTGAACCATCAGGTGGGTTTAATCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCTGGACCAGGCAAGTCCAAGAGATTTTCCTCTGATGGAGGGGGAGCTTTTAATGGATTTGGTGGAAATGAAAATATTTTTAGAACATATAGTGAACGTGGGAATATGCTAAAGAAGCCCCCACCTGTTGAGACCAAATTGCCTTGCAGTTTGGAGGAGTTATATTCTGGATCTACAAGGAAAATGAAAATCTCAAGGACTGTAATAGATGCCAATGGAAGGCCATGTCCAGAAACAGAGATATTAACTATTGAAGTGAAGCCGGGTTGGAAGAAAGGGACCAAGATTACCTTCCCAGATAAAGGGAATCAGCAACCAAATCAACAGGCAGCAGACCTTGTATTTGTGATTGATGAGAAGCCTCATGATTTGTTCAAACGAGATAGCAATGACCTCATTGTGAGCCAAAGGGTGTCACTAGCAGAGGCTATTGGAGGAACTTCAATAAATCTCAAAACACTTGATAACCGTAGTTTATGTATCCCAGTGACTGATATTGTGAGTCCTGGTTATGAGCTGGTTGTTGCAAATGAAGGAATGCCAATAACAAAAGAGCCTGGTCATAGGGGTGACTTGAGGATCATATTTGAGCTTGAGGAATGA 933 0.4137 MGVDYYNILKVDRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKQISEAYDVLSDPQKRAIYDQHGEEGLKDRPPPDSEPSGGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSKRFSSDGGGAFNGFGGNENIFRTYSERGNMLKKPPPVETKLPCSLEELYSGSTRKMKISRTVIDANGRPCPETEILTIEVKPGWKKGTKITFPDKGNQQPNQQAADLVFVIDEKPHDLFKRDSNDLIVSQRVSLAEAIGGTSINLKTLDNRSLCIPVTDIVSPGYELVVANEGMPITKEPGHRGDLRIIFELEE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00079 310 MobiDBLite consensus disorder prediction 69 90 - -
Sebi198g00079 310 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Sebi198g00079 310 Gene3D - 232 309 - -
Sebi198g00079 310 CDD DnaJ 4 59 IPR001623 -
Sebi198g00079 310 Gene3D DnaJ domain 3 111 IPR036869 -
Sebi198g00079 310 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Sebi198g00079 310 FunFam Dnaj homolog subfamily b member 148 230 - -
Sebi198g00079 310 FunFam DnaJ subfamily B member 13 232 309 - -
Sebi198g00079 310 SUPERFAMILY Chaperone J-domain 3 110 IPR036869 -
Sebi198g00079 310 SUPERFAMILY HSP40/DnaJ peptide-binding domain 152 233 IPR008971 GO:0006457|GO:0051082
Sebi198g00079 310 SUPERFAMILY HSP40/DnaJ peptide-binding domain 235 308 IPR008971 GO:0006457|GO:0051082
Sebi198g00079 310 Gene3D - 152 230 - -
Sebi198g00079 310 PRINTS DnaJ domain signature 6 24 IPR001623 -
Sebi198g00079 310 PRINTS DnaJ domain signature 24 39 IPR001623 -
Sebi198g00079 310 PRINTS DnaJ domain signature 62 81 IPR001623 -
Sebi198g00079 310 PRINTS DnaJ domain signature 42 62 IPR001623 -
Sebi198g00079 310 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 307 - -
Sebi198g00079 310 CDD DnaJ_C 151 309 - -
Sebi198g00079 310 Pfam DnaJ C terminal domain 153 308 IPR002939 -
Sebi198g00079 310 Pfam DnaJ domain 4 67 IPR001623 -
Sebi198g00079 310 SMART dnaj_3 3 62 IPR001623 -
Sebi198g00079 310 FunFam DnaJ subfamily B member 13 3 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi198g00079 Sebi-Chr198 1154472 1156368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi198g00079 5 151 C2H2 Transcription Factor Family AT1G74250 32.680 1.15e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00079 K09510 - qsa:O6P43_019394 489.574