Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00061 ATGGAAGACAATGAATGTCAACCACTTGAAATTGATAAGCCCAAGGATATTTTTCTTGGACAAGTTGTTTATAGTATGGACGAAGCCTATAACTTATACCAAGAACATGCTTTCAAAATGGTCTTTAGTGTAAGAAAATGGAGGCAACTGTATTACGATAATGAGAAGAAGATCACATGCTTGAAAGAATTTTATTGCTTCAAGGAAGGGTTTAAGAATAATGAAGCTGAAGGTGAAGTGGCTTATGAAAGAGCAGATTCAAGGACAAATTGCAAAGCCATGTCCATGAGCTCAAAGATGTTAAAATTGTGTTTCCTCATCATGAAAATGATTACAAAAGGTTATATCCTTCCACAACATTACATTTCGAATGTTGAAAACATCAAGAGCAGTAGCAATTCAAGGTTGATGAAGTACAAAGTTTCTGAAAAAAGCAGCAACGATGCCCCTGAGGTTGCCCTCATAGCTCACACTGACAAAAGTGCCTTAGCCATTCTATGCCAAAATGAAGCCTGGAGCAATGGGAGACTTCATGCCACCACACATAGAGTGATAATGAGTGGAGAGAAAGAGAGGTACTCATTTGGACTTTTTGCAGTGCCAAATAATGATGGTGTCATTAAGGTGCCACATGAGCTGGTTGATGATGAAATTCATCCTCTTCGTTACAAGCCATTCAAATATGGGGAGCACTTCAACTATCATGTTTCAACTCTTGATGGAAAAAAAACTCTTGAAGGAAATGCACTTGAGGCATTTGCAGGCCTTTGA 771 0.3839 MEDNECQPLEIDKPKDIFLGQVVYSMDEAYNLYQEHAFKMVFSVRKWRQLYYDNEKKITCLKEFYCFKEGFKNNEAEGEVAYERADSRTNCKAMSMSSKMLKLCFLIMKMITKGYILPQHYISNVENIKSSSNSRLMKYKVSEKSSNDAPEVALIAHTDKSALAILCQNEAWSNGRLHATTHRVIMSGEKERYSFGLFAVPNNDGVIKVPHELVDDEIHPLRYKPFKYGEHFNYHVSTLDGKKTLEGNALEAFAGL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00061 256 Gene3D - 170 252 IPR027443 -
Sebi198g00061 256 Pfam FAR1 DNA-binding domain 32 98 IPR004330 -
Sebi198g00061 256 Gene3D - 17 169 IPR027443 -
Sebi198g00061 256 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 170 231 - -
Sebi198g00061 256 SUPERFAMILY Clavaminate synthase-like 57 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi198g00061 Sebi-Chr198 985481 986671 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi198g00061 FAR1 2.5e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00061 - - gmx:100790408 179.104