Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00058 ATGGAAGAAATTGAAGGATTGAATTGTTGTAGTGAAAGTAGGAGCTGCAGTGAGAGTCGACCTCCCAATCCCAATCCATCTGCTGCTGCTGCATATCGCCAATGCCAACGCACTGACCCTATGGTGATGCCATGCAAGAAATCCCTTGTTCGCCACGCTTCTCTTCAGCCAAAAACGAAGTTGTCTGATGTATCTGCTGAGCCAGGGCATGCTACTGAAGACTGTCAATCTGATTTCCTTCCAAAGCTTCGCTCTGGAGCATGTGGTGATATTGGGTTCAGGTCATGTATGGAAGATGTATATGTTTGTGCTGACAACTTTATGCAGGATTATGGGCTCAAGAACCATATAGATGGACCCAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCACGCTGCTGATTTTGCTTGCCATCATTTGCCGAAGTTCATTCTTGAGGATGAAGATTTCCCAGAAAATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACAGACAAAGCCTTTGCAGAAGCTTGCTCTCTGGATGCTGCCCTTGCATCTGGCACCACTGCATTGGCTACTCTTGTTATTGGAAGGTTACTGGTGGTGGCAAATGCCGGAGATTGTCGAGCTGTACTGTGCCATCGTGGAAAAGCAATTGAGATGTCAAGAGATCATAAACCAATCTGCAGTAAAGAGAAGAAGCGAATCGAGGCATCTGGAGGGTTTGTCTATGATGGATACCTCAACGGACAGCTTAATGTTGCTCGTGCTATAGGTGACTGGCACATGGAAGGAATGAAAGGCAAAGATGGCGGACCACTCAGTGCAGAACCTGAACTTATGACTACAAAACTCACTGCTGAGGATGAATTTCTCATCATAGGTTGTGATGGAATTTGGGATGTATTTAGGAGCCAAAATGCAGTAGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGACCCAGCCATGTGTAGTAAAGATCTGGTTGATGAGGCATTAAAGAGAAAGAGTGGAGACAATTTAGCTGCTGTTGTGGTTTGCTTCCAGCAGCAGCCACCACCTAACTTGGTGGCACCGCGCTCTAGAGTGCACAGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTAGACAGCTTGGGTAATTGA 1152 0.4627 MEEIEGLNCCSESRSCSESRPPNPNPSAAAAYRQCQRTDPMVMPCKKSLVRHASLQPKTKLSDVSAEPGHATEDCQSDFLPKLRSGACGDIGFRSCMEDVYVCADNFMQDYGLKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFILEDEDFPENIERIVASAFLQTDKAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCHRGKAIEMSRDHKPICSKEKKRIEASGGFVYDGYLNGQLNVARAIGDWHMEGMKGKDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00058 383 Gene3D - 63 351 IPR036457 -
Sebi198g00058 383 Pfam Protein phosphatase 2C 91 339 IPR001932 -
Sebi198g00058 383 MobiDBLite consensus disorder prediction 1 29 - -
Sebi198g00058 383 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Sebi198g00058 383 MobiDBLite consensus disorder prediction 10 29 - -
Sebi198g00058 383 SUPERFAMILY PP2C-like 79 349 IPR036457 -
Sebi198g00058 383 FunFam Probable protein phosphatase 2C 22 69 350 - -
Sebi198g00058 383 CDD PP2Cc 84 347 IPR001932 -
Sebi198g00058 383 ProSiteProfiles PPM-type phosphatase domain profile. 84 347 IPR001932 -
Sebi198g00058 383 PANTHER PROTEIN PHOSPHATASE 2C 69 345 IPR015655 GO:0004722|GO:0006470
Sebi198g00058 383 SMART PP2C_4 74 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi198g00058 Sebi-Chr198 919025 921614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi198g00058 1 383 PP2C-type Phosphatase Gene Family AT2G25620 68.448 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00058 K14803 - gmx:100815725 639.802