Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00022 ATGCCTCAGCTGCTACATGGGACGCTTAAGGTAACCATAAATGAAGTTGATAGGCTGCACACTGGATGCAATTTGGATTTCTTGCAGAAGGGCACAACACATAAGACGAAGAGATTTCTAGCCCAAGTCAAGGGTTGTCTTCTATGCCGGCCTGAGATTGTTGGGACAAGACTCTATGCAACAGTTGATTTAGATAAGGCAAGAGTAGCACGAACCAGAATGATAGGAAATCAACCCTCCAACCCCAAATGGAAGGAGACCTTTGAAATTTATTGTGCTCATAATGTCTCAAACATTATATTCACTGTCAAAGATGGTAATCCAATTGGTGCAACTCTAATTGGAAGAGCTTATGTCCCTGCTAACCATGTCATCAAGGGTCCTATAATTAACAGATGGGTTGAGATAATAGATGATGAAGATCATCGTCCTGTTAGGGGTCACTCTAAAATTTGTGTCAGTGTGCAATTCACAAGTGTTACTGAGGATAAAAAATGCCAATGGTCTCAAGGAATACACATGCCATTTATGGGAGTTCCTCGTACATTTTTCAACCAAAGAGAAGGTTGTAATGTCACTTTATACCAAGATGCACATGTTCCTGATAATGCACTCCCTTGGATTCCAATTTCAGGTACAAAATATTATGTGCCTGGGAGATGTTGGGAGGACATTTACAATGCCATTGTGGAAGCTAAGTACTTTATTTACATAACTGGTTGGTCTGTGTATACTGAAATAACTTTGATTAGGGATGCAAAGAATTTAAAAACAAGTGTCAAACTTGGGGAGTTGCTTAAGATGAAAGCTGATGAAGGGGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCAGACCTGAAAAAAGATGGCTTGATGGCAACCCATGATCAAGAAACTGCTGATTATTTTAGAAACACAAAGGTGCATTGTGTTTTGTGTCCACGTGACCCTGGTGGTGGAAGAAGCATGGTTCAAGGTTTTCAAATCTCAACAATGTTTACTCACCACCAAAAGACTATAATACTTGATAGCAAAATTGAAGGATTGAAAAAGAGAAAGGTTATAAGTTTCATAGGTGGTCTTGATCTTTGTGATGGGAGATATGATACTAGGGAACATCCTCTATTTTCAACTCTTAATACAGTCCATCATGATGATTTCCATCAACCAAATTTCCCAGGTGCTTCCATAAAAAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGCTAGAAGGACCTATTGCATGGGATGTCTTGTATAATTTTGAGCAAAGGTGGGAGAAGCAAGCTGGGAAGGAATTCCAACAATTCCTATTCCCACTTGATGTGCTTGATAGATTTCTAGTCCATCCATCTGAAGCAGTGCCATCAGAAGATGGGGACATGTGGAATGTTCAGTTGTTCAGGTCTATTGATGGTGGTGCTGTCTCTAACTTCCCTCAAGCCCCAGATGAAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAAATAACATCATTGATAGAAGTATTCAGGATGCTTATATATATGCTATTAGGAGAGCAAAGAATTTCATCTACATTGAAAATCAGTATTTCCTAGGTAGTTCATATGGTTGGAAACCATCTGAGTCTGTGTCTGACATAAAAATTGAGGATATTAATGCTTTGCATCTTATACCAAAGGAGCTTTCATTGAAGATTGTTAGCAAGATTGAAGCAGGAGAGAGGTTTGTTGTGTATGTGGTGATCCCAATGTGGCCAGAAGGTGTACCTGAAAGTGCTTCTGTTCAGGCAATATTAGGTTGGCAAAGGAGGACCATGGAGATGATGTATTCTGACATTGCTGATGCCATAAAGAAGAAGAACATTGAAGCACACCCTAGGGATTATTTGACATTCTTTTGCCTTGGCAAGAGGGAGAGAAAGACAGAAGGAGAATATACTCCTCCAGAGGAACCAGAGCCTGACAGTGACTATCAAAGAGCACAAAATGCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATTGTTGATGATGAATACATAATCATTGGTTCTGCCAACATCAACCAGAGATCAATGGATGGTGGAAGAGACACAGAGATTGCAATGGGGGCAATCCAACCACATCATCTAACATCCCTTGGCCCAAAAAGACCACAAGGTCAGATTTATGGGTTCAGGAGAGCATTATGGTATGAGCATATTGGGGATTCTCATGAGGCTTTTGATGAGCCTGAAAGTGAGGAATGTGTGAAACTTGTGAATGGTGTTGCTGAGATGAACTGGGAGTTATACTCCAAAGACACACTTGATGAAAGTGATCAACCAGTTCACCTTTTGAGATATCCTATAGAAGTGGCCAAAGATGGAACTATAACAACACTGCCAGGGCATGAATTTTTTCCTGACACCAAGGCTCCTATTCTTGGTTCAAAAGAATATAATTACATTCCTCCTATTCTTGGTTCACAAAACTCTAATTTCCTTCCTCCAATCCTTACCACCTAG 2517 0.4029 MPQLLHGTLKVTINEVDRLHTGCNLDFLQKGTTHKTKRFLAQVKGCLLCRPEIVGTRLYATVDLDKARVARTRMIGNQPSNPKWKETFEIYCAHNVSNIIFTVKDGNPIGATLIGRAYVPANHVIKGPIINRWVEIIDDEDHRPVRGHSKICVSVQFTSVTEDKKCQWSQGIHMPFMGVPRTFFNQREGCNVTLYQDAHVPDNALPWIPISGTKYYVPGRCWEDIYNAIVEAKYFIYITGWSVYTEITLIRDAKNLKTSVKLGELLKMKADEGVNVLMLVWDDRTSVPDLKKDGLMATHDQETADYFRNTKVHCVLCPRDPGGGRSMVQGFQISTMFTHHQKTIILDSKIEGLKKRKVISFIGGLDLCDGRYDTREHPLFSTLNTVHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQAGKEFQQFLFPLDVLDRFLVHPSEAVPSEDGDMWNVQLFRSIDGGAVSNFPQAPDEVAELGLVSGKNNIIDRSIQDAYIYAIRRAKNFIYIENQYFLGSSYGWKPSESVSDIKIEDINALHLIPKELSLKIVSKIEAGERFVVYVVIPMWPEGVPESASVQAILGWQRRTMEMMYSDIADAIKKKNIEAHPRDYLTFFCLGKRERKTEGEYTPPEEPEPDSDYQRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAIQPHHLTSLGPKRPQGQIYGFRRALWYEHIGDSHEAFDEPESEECVKLVNGVAEMNWELYSKDTLDESDQPVHLLRYPIEVAKDGTITTLPGHEFFPDTKAPILGSKEYNYIPPILGSQNSNFLPPILTT 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00022 838 Gene3D C2 domain 7 169 IPR035892 -
Sebi198g00022 838 Gene3D Endonuclease Chain A 477 714 - -
Sebi198g00022 838 Pfam Phospholipase D Active site motif 335 371 IPR001736 GO:0003824
Sebi198g00022 838 Pfam Phospholipase D Active site motif 669 695 IPR001736 GO:0003824
Sebi198g00022 838 SMART C2_3c 8 133 IPR000008 -
Sebi198g00022 838 PANTHER PHOSPHOLIPASE D 4 814 IPR015679 -
Sebi198g00022 838 SUPERFAMILY Phospholipase D/nuclease 179 447 - -
Sebi198g00022 838 SMART pld_4 668 695 IPR001736 GO:0003824
Sebi198g00022 838 SMART pld_4 335 371 IPR001736 GO:0003824
Sebi198g00022 838 Pfam Phospholipase D C terminal 743 815 IPR024632 -
Sebi198g00022 838 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Sebi198g00022 838 FunFam Phospholipase D delta 212 445 - -
Sebi198g00022 838 FunFam Phospholipase D 477 714 - -
Sebi198g00022 838 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 668 695 IPR001736 GO:0003824
Sebi198g00022 838 CDD PLDc_pPLD_like_1 212 385 - -
Sebi198g00022 838 CDD C2_plant_PLD 1 158 - -
Sebi198g00022 838 Pfam C2 domain 37 135 IPR000008 -
Sebi198g00022 838 SUPERFAMILY Phospholipase D/nuclease 507 750 - -
Sebi198g00022 838 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi198g00022 838 Gene3D Endonuclease Chain A 211 447 - -
Sebi198g00022 838 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 335 371 IPR001736 GO:0003824
Sebi198g00022 838 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 159 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi198g00022 Sebi-Chr198 411918 416095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi198g00022 3 838 Phospholipase D Gene Family (Wang group) AT3G15730 62.618 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00022 K01115 - gmx:100794115 1246.49