Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00021 ATGTCGCATTTGCTGCACGGGAAGCTCGATGTGATTATATATGAAGTCGATACACTACAAACCGCGTGCAATTTCAATCTCTGTGACAAGGTTATTGGGATGGGTCTCTATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGGAGGACCAGGATGTTAGATGATCAACCCTCCAACCCCAAGTGGAATGAGACCTTTCACATATATTGTGCCCATTTAATCTCCAACATTATATTCACTGTCAAACAAAATAACCCCATTGGGGCTACTCTAATTGGAAGAGCTTATGTCCCTGTTGGCCAAGTTATTAAGGGCAATATAGTGGATACATGGGTCCAGATATTAGATGAGAACCATCATCCCATACCAAGTGGCTCTAAAATCCATGTTAGAATGCAATACTTTGATGTCAAGAATGACTCAAACTGGTCTCAAGGAATAAGGAGTCCAGGATTTCAAGGAGTTCCACACACATTCTTTAGTCAAAAAACTGGTTGCAGAGTTACTTTGTACCAAGATGCTCATGTTGCAGATGTTTTTGTGCCTAGGATCCCATTATATGGAGGAAAACCTTATGAGCCTGGGAGATGCTGGGAGGATATTTACAATGCCATTATGGATGCTAATTACTTTATTTACATAACTGGTTGGTCTGTGTATACTGAAATAACCTTGATTAGGGACACAAGGAAATCAAGTATCAAACTTGGAGATTTGCTTAAGATGAAAGCAGATGAAGGTGTTACTGTTCTTATGCTTATTTGGGATGACAGAACCTCTGTTCCAGACCTGAAGAAAGATGGCTTGATGGCAACTCATGATCAAGAAACTGCTGAATTTTTTAGAAACACAAAAGTGCATTGTGTTTTGTGTCCACGTGACCCTGGTGGTGGAAGAAGCATGGTTCAAGGTTTTGAAATCTCAACCATGTTTACTCACCACCAAAAGACTATTGTACTTGATAGCCAAGTTGTTGGAGCTGTGGGAAGATGGCAAAAGAGAACAATCTCAAGCTTCATAGGTGGTATTGATTTGTGTGATGGAAGATATGATACACAAGAACATCCTCTATTTTCAACTCTTAACACAGTCCATCATGATGATTTCCATCAACCAAATTTCCCAAGTGCTTCAATCAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGCTAGAAGGACACATTGCTTGGGATGTATTGTGCAATTTTGAGCAAAGGTGGAGGAAGCAAGCTGGGAAGGAACTCCAACAATTCCTACTCCCTTCAAGCATGTTTGATGAATATCTTGTCCCTAAATCAAGTGTAGCAACAACAAATGAAAATGAGACATGGAATGTTCAAGTGTTCAGATCCATTGATGGTGGTGCTGCTTCTGGTTTCCCACAAGACCCTGATGAAGCTGCTGAATTAGGCCTTGTTAGTGGGAAAGATAACATCATTGATAGAAGCATTCAAGATGGTTACATAAATGCTATTAGGAGAGCAAAGAATTTCATCTACATTGAGAATCAGTATTTCCTAGGGAGTTCATATGGTTGGAAAGGATCTGATATTAAAGTTGAGGATATAAATGCTTTGCATCTTATACCAAAGGAGTTGTCATTGAAGATTGTTAGCAAGATTGAAGCAAGAGAGAGGTTTTCTGTCTACATTGTCATCCCAATGTGGCCAGAAGGTGTGCCTGAGAGTGAGTCAGTTCAAGCTATATTAGATTGGCAAAGGAGGACAATGGAGATGATGTATACTGATATTGCTGAAGCCATCCGGAGAATGAGAATTAGAGCACACCCTAGGGATTACTTGACTTTTTTCTGCCTTGGAAATCGTGAGGGTATGGAAGGTAAAGAATATATCCCTTTGGAGACACCAGAGCCTGATAGTGATTATAGTAGAGCACAAAAGTCCAGGCGATTTATGATCTATGTTCATGCAAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAACCAAAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGAGCATTCCAACCACGCCATTTAAGTGTAACATCTTCGAGAGGACAGATATATGGATTGAGACGTGCATTATGGTATGAGCACCTTGGGGATGATGGTGATACAAACATCTTTGACAATCCAGAAAGTGTGAACTGCATCAAGCTTGTGAATCGTTTAGCTGAGACCAACTGGGACATATACTCACAGGAAACATTTGATGAATACAGAGCATTTCACCACCTCATGCGTTACCCTGTACAAGTAACATATGATGGAGCCATAACAAACCTTCCAGGACTTGAATGTTTTCCTGATACCAAGGCTCGGATTCTCGGTTCCAAAGCACAGTACCTTCCTCCAATTCTCACCACCTAG 2397 0.4068 MSHLLHGKLDVIIYEVDTLQTACNFNLCDKVIGMGLYATVDLDKARVGRTRMLDDQPSNPKWNETFHIYCAHLISNIIFTVKQNNPIGATLIGRAYVPVGQVIKGNIVDTWVQILDENHHPIPSGSKIHVRMQYFDVKNDSNWSQGIRSPGFQGVPHTFFSQKTGCRVTLYQDAHVADVFVPRIPLYGGKPYEPGRCWEDIYNAIMDANYFIYITGWSVYTEITLIRDTRKSSIKLGDLLKMKADEGVTVLMLIWDDRTSVPDLKKDGLMATHDQETAEFFRNTKVHCVLCPRDPGGGRSMVQGFEISTMFTHHQKTIVLDSQVVGAVGRWQKRTISSFIGGIDLCDGRYDTQEHPLFSTLNTVHHDDFHQPNFPSASIKKGGPREPWHDIHCKLEGHIAWDVLCNFEQRWRKQAGKELQQFLLPSSMFDEYLVPKSSVATTNENETWNVQVFRSIDGGAASGFPQDPDEAAELGLVSGKDNIIDRSIQDGYINAIRRAKNFIYIENQYFLGSSYGWKGSDIKVEDINALHLIPKELSLKIVSKIEARERFSVYIVIPMWPEGVPESESVQAILDWQRRTMEMMYTDIAEAIRRMRIRAHPRDYLTFFCLGNREGMEGKEYIPLETPEPDSDYSRAQKSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPRHLSVTSSRGQIYGLRRALWYEHLGDDGDTNIFDNPESVNCIKLVNRLAETNWDIYSQETFDEYRAFHHLMRYPVQVTYDGAITNLPGLECFPDTKARILGSKAQYLPPILTT 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00021 798 SMART pld_4 642 669 IPR001736 GO:0003824
Sebi198g00021 798 SMART pld_4 309 349 IPR001736 GO:0003824
Sebi198g00021 798 Gene3D Endonuclease Chain A 189 447 - -
Sebi198g00021 798 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Sebi198g00021 798 SUPERFAMILY Phospholipase D/nuclease 140 426 - -
Sebi198g00021 798 Gene3D Endonuclease Chain A 459 685 - -
Sebi198g00021 798 Pfam C2 domain 8 113 IPR000008 -
Sebi198g00021 798 CDD C2_plant_PLD 4 135 - -
Sebi198g00021 798 SUPERFAMILY Phospholipase D/nuclease 488 683 - -
Sebi198g00021 798 Pfam Phospholipase D C terminal 716 788 IPR024632 -
Sebi198g00021 798 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 642 669 IPR001736 GO:0003824
Sebi198g00021 798 Pfam Phospholipase D Active site motif 309 349 IPR001736 GO:0003824
Sebi198g00021 798 Pfam Phospholipase D Active site motif 643 669 IPR001736 GO:0003824
Sebi198g00021 798 FunFam Phospholipase D 455 688 - -
Sebi198g00021 798 FunFam Phospholipase D delta 188 427 - -
Sebi198g00021 798 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 137 IPR035892 -
Sebi198g00021 798 SMART C2_3c 8 111 IPR000008 -
Sebi198g00021 798 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 309 349 IPR001736 GO:0003824
Sebi198g00021 798 PIRSF PLD_plant 1 798 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi198g00021 798 PANTHER PHOSPHOLIPASE D 4 787 IPR015679 -
Sebi198g00021 798 Gene3D C2 domain 5 147 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi198g00021 Sebi-Chr198 405912 409597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi198g00021 3 798 Phospholipase D Gene Family (Wang group) AT3G15730 64.251 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00021 K01115 - gmx:100791688 1297.34