Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi198g00012 ATGAGTTCAAGTCTCAGTAACCATCTTGTGCAGTGCTCAATCGCCACCGCTTCAGATGCCGAAACCGATTTTCCCGCCAAATTACAACGGTCATCTTTCTCAACGGTCAAGTTTCACCCTGACAAGCCCAACGACCATGGTTCTTCTGGTGAGTGTGGCAACCTTGAAACTCTGATTCTTTCGGATAGGGTTGTCGTTGTGCTTATTATGATTCACTATATAATAGATATAGCAGTTTCATTTTCAAGTAGCAGAAGGAGAGGGCTAATATGCATAGCCACTTTGCCATGTCTTCTTCCCCTAACTCAAATCCTTGGTTGTCTCCGAGCCAACGCGATGCAGCCAGGTACAAAGGAATATCTTCTCATTAAAGAGGAGGTGAGGAAGGTATTGTCAAAAGGCAAGGCTGCAGGCGTGCTTCGTTTGGTTTTCCACGATGCTGGAACCTTTGAAGTCGATGACAATACAGGTGGTATGAATGGTTCTATAGTCTACGAACTTGAAAGACCTGAAAATGCTGGCCTGAAAAAATCAGTAAAGGTTCTGCAAAAAGCAAAGACTCAGATAGATGCTATCCAACCAGTATCCTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAATATGTGGAGGTCCACCTATCCAAGTATCACTGGGTAGACAAGATTCACTGGAGCCTGATCCTGAAGGCAAACTTCCTGAGGAAACTCTCGATGCTTCTGGTTTGAAGAAATGCTTCAAGAGAAAAGGCTTTTCAACACAAGAACTTGTTGCTTTGTCTGGAGCTCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCTACCTCATTTGACAATTCATATTATAAGGTTCTTTTAGATAAGCCGTGGACATCTCCAGGTGGTATGACGAGTATGATTGGTCTTCCTTCAGATCATGCGCTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAATATGCAGACAATGAGAATATGTTCTTCGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTAAGGTGGAATAGCTTATAA 1056 0.4309 MSSSLSNHLVQCSIATASDAETDFPAKLQRSSFSTVKFHPDKPNDHGSSGECGNLETLILSDRVVVVLIMIHYIIDIAVSFSSSRRRGLICIATLPCLLPLTQILGCLRANAMQPGTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFEVDDNTGGMNGSIVYELERPENAGLKKSVKVLQKAKTQIDAIQPVSWADMIAVAGAEAVEICGGPPIQVSLGRQDSLEPDPEGKLPEETLDASGLKKCFKRKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLDKPWTSPGGMTSMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNSGVRWNSL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi198g00012 351 PRINTS Plant ascorbate peroxidase signature 213 225 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Plant ascorbate peroxidase signature 194 212 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Plant ascorbate peroxidase signature 252 273 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Plant ascorbate peroxidase signature 322 346 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Plant ascorbate peroxidase signature 136 151 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Plant ascorbate peroxidase signature 154 164 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Plant ascorbate peroxidase signature 234 251 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 FunFam Adenylate/guanylate cyclase 236 338 - -
Sebi198g00012 351 Gene3D Peroxidase, domain 2 236 338 - -
Sebi198g00012 351 PRINTS Haem peroxidase superfamily signature 136 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Haem peroxidase superfamily signature 195 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PRINTS Haem peroxidase superfamily signature 213 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 118 349 IPR044831 GO:0004601|GO:0034599
Sebi198g00012 351 ProSiteProfiles Plant heme peroxidase family profile. 136 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 258 268 IPR019793 -
Sebi198g00012 351 FunFam L-ascorbate peroxidase 126 243 - -
Sebi198g00012 351 SUPERFAMILY Heme-dependent peroxidases 133 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 Pfam Peroxidase 125 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi198g00012 351 Gene3D - 124 345 - -
Sebi198g00012 351 ProSitePatterns Peroxidases active site signature. 136 147 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi198g00012 Sebi-Chr198 226536 230721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi198g00012 87 349 Peroxidase AT5G47000 29.299 9.69e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi198g00012 K00434 - gmx:100792735 513.457