Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi197g00024 ATGGATAAAGGGTGGGTTTCAGCTTGTTGGGGTACTGTTGGGGTAGAAGGATATCCAAATGAAGATCTGGTTGTGAAACTCCCTGGCCAACCCAAGGTTGGGTTTAAGCAGTATGCTGGGTATGTTGATGTAGATGTCAAGCATGGAAGAAGCTTGTTCTACTATTTTGTGGAAGCTGAGGAAGAACCTGAAAAGAAGCCCCTCACACTTTGGCTCAATGGAGGTCCCGGTTGTTCCTCCATTGGAGGAGGTGCTTTTACTGAATTGGGACCCTTTTATCCTAAAGGTGATGGACGTGGTCTCCGAAGAAATTCCAAGTCTTGGAATAAAGCATCCAACCTACTTTTCGTTGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCAGATTATAACACTGGAGATGCATCCACTGGACACTACATACCACAGTTAACAAATGTTCTACTGGACCACAATGCTCGTTCAACTGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTCTGAAACTTGATCGGGATGCACCTGCCACATATGAATACTTCTGGTCACATGGAATGATTTCTGATGAAATTGGCCTTGCCATCATGAATAATTGTGACTTGATGATTATGCCTATGCAACTCCTCACAACGTTTCTGATTCATGCAACAATGCCATTGGAACAAGAACTGAGATTGAAAAAGATGGCTACTAAAATAAGTGTAGGTATAGATGTCTGTATGACTTTTGAAAGACGTTTCTACTTCAACCTTCCTGAGGTTCAGAAGGCTCTCCATGCAAACCGGACTAATCTTCCTTATAGCTGGTCCATGTGTAGTCGTGTTCTAAACTATAGCGACACTGATGGTAACATCAACATCCTACCAATTCTCAAAAGGATAGTCCAAAATCATATCCCAGTATGGATTTTCAGTGGAGACCAAGATTCTGTTGTGCCATTATTGGGATCTCGAACACTAATTCGTGAATTAGCTCATGAATTACAATTCAAGATTACAGTTCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTGTTGACTTTTGCCACTGTAAGGGGAGCTGCTCATATGGTACCTTATGCACAACCTTCAAGAGCACTGCATCTATTCAGTTCATTTGTTCGTGGAAGGAGGTTGCCAAATGCAACACGTCCTTCAATTGATGAATAA 1224 0.4199 MDKGWVSACWGTVGVEGYPNEDLVVKLPGQPKVGFKQYAGYVDVDVKHGRSLFYYFVEAEEEPEKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSKSWNKASNLLFVESPAGVGWSYSNTTSDYNTGDASTGHYIPQLTNVLLDHNARSTGFKFNIKGVAIGNPLLKLDRDAPATYEYFWSHGMISDEIGLAIMNNCDLMIMPMQLLTTFLIHATMPLEQELRLKKMATKISVGIDVCMTFERRFYFNLPEVQKALHANRTNLPYSWSMCSRVLNYSDTDGNINILPILKRIVQNHIPVWIFSGDQDSVVPLLGSRTLIRELAHELQFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNATRPSIDE 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi197g00024 407 Gene3D - 295 394 - -
Sebi197g00024 407 SUPERFAMILY alpha/beta-Hydrolases 20 397 IPR029058 -
Sebi197g00024 407 Gene3D alpha/beta hydrolase 140 238 IPR029058 -
Sebi197g00024 407 PRINTS Carboxypeptidase C serine protease (S10) family signature 364 377 IPR001563 GO:0004185|GO:0006508
Sebi197g00024 407 PRINTS Carboxypeptidase C serine protease (S10) family signature 104 116 IPR001563 GO:0004185|GO:0006508
Sebi197g00024 407 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 127 IPR001563 GO:0004185|GO:0006508
Sebi197g00024 407 Gene3D - 248 284 - -
Sebi197g00024 407 Pfam Serine carboxypeptidase 29 140 IPR001563 GO:0004185|GO:0006508
Sebi197g00024 407 Pfam Serine carboxypeptidase 229 394 IPR001563 GO:0004185|GO:0006508
Sebi197g00024 407 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 138 IPR001563 GO:0004185|GO:0006508
Sebi197g00024 407 Gene3D alpha/beta hydrolase 19 139 IPR029058 -
Sebi197g00024 407 FunFam Carboxypeptidase 295 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi197g00024 Sebi-Chr197 885634 890487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi197g00024 254 397 Calmodulin-binding Proteins AT2G22960 26.389 2.45e-11 60.5