Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi197g00011 ATGGTGATTGGAGGCACTGTGAATGAGAATGGGATTTTGCATGTTAAGGTAACAAGGGTTGGATCAGAGAGTGCCCTTTCCCAGATTGTTCGACTTGTTGAGTCTGCCCAAATGGCTAAAGCTCCTGTCCAGAAACTTGCAGACCAAATTTCTAAATATTTTGTTCCACTAGTCATTGTGCTTTCCCTTTCAACATTTCTTTCTTGGTTTGTAGCTGGAAAGTTACATGCATACCCAAAATCTTGGATACCATCCTCCATGAACAACTTTGAGCTTGCACTTCAGTTTGGAATTTCACTGATGGTCATAGCCTGCCCTTGTGCTCTTGGCCTAGCCACTCCTACAGCTGTCATGGTTGGTACTGGAGTTGGTGCAACTCAAGGTGTGTTGATCAAAGGGGGGCAAGCATTAGAAAGTGCACACAAGGTGCTTCCTAATACCACTGGTCCATTGAGGATGCCAGTGATTGGTATGGATTCTGCCCCTGACTTCACCTGTAAGAAAGACACAAAAGAGGCTATCATTGAGGCTGTGAAGCAGGGCTACAGGCACATTGATTCTGCTGCATCATATGGGTCAGAGAAGGCTCTTGGGGAAGCATTGAAGGAGGCAATAGAGCTTGGCCTTGTCTCCCGAGAAAACCTATTTGTCACTTCCAAGTTCTGGGTCACTGAAAACCATCCTCATTTTGTTCTTCCTGCCTAG 705 0.4567 MVIGGTVNENGILHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADQISKYFVPLVIVLSLSTFLSWFVAGKLHAYPKSWIPSSMNNFELALQFGISLMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVLPNTTGPLRMPVIGMDSAPDFTCKKDTKEAIIEAVKQGYRHIDSAASYGSEKALGEALKEAIELGLVSRENLFVTSKFWVTENHPHFVLPA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi197g00011 234 ProSitePatterns Aldo/keto reductase family signature 1. 181 198 IPR018170 GO:0016491
Sebi197g00011 234 Pfam E1-E2 ATPase 1 125 - -
Sebi197g00011 234 Gene3D - 141 234 IPR036812 -
Sebi197g00011 234 Pfam Aldo/keto reductase family 164 221 IPR023210 -
Sebi197g00011 234 SUPERFAMILY Calcium ATPase, transmembrane domain M 36 139 IPR023298 -
Sebi197g00011 234 Gene3D - 1 140 - -
Sebi197g00011 234 SUPERFAMILY NAD(P)-linked oxidoreductase 162 233 IPR036812 -
Sebi197g00011 234 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi197g00011 Sebi-Chr197 507097 508371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi197g00011 2 156 Primary Pumps ATPases AT1G63440 81.250 7.70e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi197g00011 K17686 - gmx:100817431 261.151