Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi196g00024 ATGAGTCGAGAACAACAAAAGCGAGGGAAGCAGGAAAAAGGTTCTGATGGTGCTGAGAAGGTTATTGTTGCCGTCAAGGCTTCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTGCTAGTGGTTGTACCCCCACAAAGTTCAGGCCGAAGACTGTGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCCAATAGTCACAAGAAGTCGACTCCAGGAACAACAAGTTCAGAACAGAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCTAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCCTGCGGATCAGTGGCTACAGAGGCCAAGAAAGCCCGGGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAGGAAAAACAGTGCATGGAAGAGCTGCAGTGCAACATTGTGGCTATGAAGCGTTCCCAGCCTAAGGTACTTCGCTTGAATTTGGTTGGATCAAAGAACAAGGATCTTGAAGAAGCTTGTCCATTACCTTCTGATCAAGCTGGTACCTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTTTTTATCTCTGAGATGAATGCTGAGTCAAAGAAAGAGGAAACCATCAAAGAAAATCAAGAACTCGATGATACTATTTCAGACACAGACAGTGAGCATTTGTCCTCATCTTCAGCAAGCTTGAGATTCCAGCCATGGATCACAGATTTACTTTTACATCAACAATCATCTCAACATACAGAAGAAAGATCAGAGAGATCTCATAATAGGCTTCAATCGTCTACAACTAGAGCTTTGCTAGAGAAATTCTCAAGGCTTGATAGAGAAGCTGAAATTGAAATTTCAAACTACAAGACTGACTTGGATTTTGGTGGAAATGTAAGAGACGCAATAGCATTATCTAGAAATGCTCCGCCAGGTCCCCCTCCGTTATGTTCAGTGTGTCAACACAAGGCTCCTGTTTTTGGAAAGCCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTTGCCACTGGTGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCGGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTGGTTATGTTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACAGGAGTGGAAACTAGAGCACGGCCACTGTTAGAAGAATATGCCATTGAGGAGCTGATTGATCCAAGGATGGGAAGTCACTACTCAGAGCATGAGGTCTCTTGCATGCTACATGCTGCATCATTATGCTTAAGGCGAGATCCTTATTGTAGACCACGCATGTCACAGGTTCTTCGAATACTAGAGGGTGACATGGTCATGGACTCAAATTGCATTTCAACTCCTGGTTATGATGTGGGCAACCGGAGTGGTTGA 1605 0.4405 MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPPQSSGRRLWGFPRFAGDCANSHKKSTPGTTSSEQKNDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGSVATEAKKARANWVVLDKQLKHEEKQCMEELQCNIVAMKRSQPKVLRLNLVGSKNKDLEEACPLPSDQAGTSSVSSSDPGTSPFFISEMNAESKKEETIKENQELDDTISDTDSEHLSSSSASLRFQPWITDLLLHQQSSQHTEERSERSHNRLQSSTTRALLEKFSRLDREAEIEISNYKTDLDFGGNVRDAIALSRNAPPGPPPLCSVCQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVGDFGLARWQPDGDTGVETRARPLLEEYAIEELIDPRMGSHYSEHEVSCMLHAASLCLRRDPYCRPRMSQVLRILEGDMVMDSNCISTPGYDVGNRSG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi196g00024 534 ProSiteProfiles Protein kinase domain profile. 365 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi196g00024 534 MobiDBLite consensus disorder prediction 187 248 - -
Sebi196g00024 534 SUPERFAMILY Protein kinase-like (PK-like) 345 517 IPR011009 -
Sebi196g00024 534 PANTHER OS01G0750732 PROTEIN 456 518 - -
Sebi196g00024 534 Pfam Protein tyrosine and serine/threonine kinase 369 439 IPR001245 GO:0004672|GO:0006468
Sebi196g00024 534 MobiDBLite consensus disorder prediction 194 216 - -
Sebi196g00024 534 Gene3D Transferase(Phosphotransferase) domain 1 446 521 - -
Sebi196g00024 534 Gene3D Phosphorylase Kinase; domain 1 336 440 - -
Sebi196g00024 534 SMART tyrkin_6 365 511 IPR020635 GO:0004713|GO:0006468
Sebi196g00024 534 Coils Coil 216 236 - -
Sebi196g00024 534 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 337 440 - -
Sebi196g00024 534 MobiDBLite consensus disorder prediction 218 241 - -
Sebi196g00024 534 MobiDBLite consensus disorder prediction 265 285 - -
Sebi196g00024 534 FunFam Dual-specific kinase DSK1-like 12 167 - -
Sebi196g00024 534 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi196g00024 Sebi-Chr196 970159 974153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi196g00024 346 440 Trihelix Transcription Factor Family AT1G26150 52.632 3.11e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sebi196g00024 PK_Tyr_Ser-Thr 8.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi196g00024 - - gmx:100789216 769.229