Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi195g00085 ATGACAGTTTCTTACTCCGGTCACCAAATTCCCCTCGCCGCCGTCCAGGTCACCGAGCTCGCCGACGGCGTTTTCGTCGGCTGCACCGTCAACCACTCCGTCACCGACGGTACCTCCTTCTGGCACTTCTTCAACACCTTCGCCGCCGCCGCCAAGAGCGGCGGCGCGAAGAAGATCACGAAGTCGCCGGACTTCACCCGTGACACCGTCTTCAACTCTGAATCCGTCCTCCCCGTCCCCGCCGGCGGACCCGCCGTCACCTTCGACGTCGACGCACCTCTCCGGGAGCGAGTCTTTCACTTCTCCCGAGAAGCCATTCAGAAACTCAAACAGAGAGCCAACGGCAACGGCAACGGAATCCCGGATTTCGCGGAAGTAATAGGTAAACAGCTATGGCGTTCGGTGACGCGTGCCAGGAAATTGGACCCTTCAAAAACGTCGACGTTTCGCATGGCCGTGAATTGCCGCCACAGATTGGAACCAAGGATGGACCCGTTTTACTTCGGCAATGCGATTCAGAGCATCCCAACCGTTGCTACTGCCGCTGACATAGTCTCTCGCGATCTACGCTTCTGCGCAGAATTGCTTCATCAAAACGTCGTCGCACACGACGACGCTACGGTGCGCCGCGGCATACAGGATTGGGAGGAGAAGGCACCGAGACTGTTCCCGCTTGGGAATTTCGACGGCGCAATGATCACCATGGGTAGTTCCCCGCGTTTTCCCATGTACGACAACGACTTCGGGTGGGGCCGGCCCTTGGCCATTCGAAGTGGCAAGGCGAACAAGTTTGACGGCAAGATCTCTGCGTTTCCTGGAAGAGAAGGAAACGGGTAG 837 0.5818 MTVSYSGHQIPLAAVQVTELADGVFVGCTVNHSVTDGTSFWHFFNTFAAAAKSGGAKKITKSPDFTRDTVFNSESVLPVPAGGPAVTFDVDAPLRERVFHFSREAIQKLKQRANGNGNGIPDFAEVIGKQLWRSVTRARKLDPSKTSTFRMAVNCRHRLEPRMDPFYFGNAIQSIPTVATAADIVSRDLRFCAELLHQNVVAHDDATVRRGIQDWEEKAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi195g00085 278 Gene3D - 2 78 IPR023213 -
Sebi195g00085 278 Gene3D - 94 278 IPR023213 -
Sebi195g00085 278 Pfam Transferase family 2 277 - -
Sebi195g00085 278 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi195g00085 Sebi-Chr195 1255042 1255989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi195g00085 8 259 Monolignol Biosynthesis Gene Families AT5G48930 28.996 7.56e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi195g00085 - - gmx:100804321 462.225