Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi195g00043 | ATGACTTTTCTGCAATCTGCAGCTAAAAAAGAGGAGGACCGGATCATAGTTGCTGCTCATGCAATCCATGGTAACAAATGGGCAGCCATAGCCAGGTGTCTACCTGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCTACTTTGAGGCGTCGGGGAGTTGAACTTGATAAGATTAAGTTAGAATCTGGTAATACAGTGGAAGATTTTAGCTTGGACAAAGTCAAAGCATCATCGGAAGACACACTATCATGTGATGTTAATTCCTTGAAATCCTCAGAAGGAAGAGATGTCAGTTCTATGGAAATCATGGATGATAAATATAAAGACAGAGCTCAGACTGAGGGTCAATTAAACCATGAAGTCAAGGATCTGCCTACCCTTTTTCGGCCAGTAGCACGTGTAAGTGCTTTTAGTGTATATCAGTCTTTCAATGGTTCACAGCCTTCAACATCAATTCCAAGACCTGTTCCAATGCAAGGGCCCATTTTACAATCATCAAAACCAGATCTTGAATTTTATAAAATGTTCGAAGGAATTTATGGTGACCAGTCAGTGCCTCACCAGTGTGGCCATGGATGCTGTGCTGCTCCAAATGGTCAAATCTCTGAAAGCTCTTTGTTGGGACCAGAATTCATCGAATTTTCAGAACCTCCATCTTTCCCAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTAGAGAATAGTAGCGTCAAAATGATGGGTGACACCGCTGGCAGGGTGATGTCTAAAGGATCTCATGTACATATTGGCCATTAG | 813 | 0.417 | MTFLQSAAKKEEDRIIVAAHAIHGNKWAAIARCLPGRTDNAIKNHWNSTLRRRGVELDKIKLESGNTVEDFSLDKVKASSEDTLSCDVNSLKSSEGRDVSSMEIMDDKYKDRAQTEGQLNHEVKDLPTLFRPVARVSAFSVYQSFNGSQPSTSIPRPVPMQGPILQSSKPDLEFYKMFEGIYGDQSVPHQCGHGCCAAPNGQISESSLLGPEFIEFSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVMSKGSHVHIGH | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi195g00043 | 270 | CDD | SANT | 10 | 50 | IPR001005 | - | |
Sebi195g00043 | 270 | PANTHER | MYB PROTEIN-RELATED | 9 | 109 | - | - | |
Sebi195g00043 | 270 | SMART | sant | 4 | 52 | IPR001005 | - | |
Sebi195g00043 | 270 | SUPERFAMILY | Homeodomain-like | 10 | 52 | IPR009057 | - | |
Sebi195g00043 | 270 | Gene3D | - | 9 | 53 | - | - | |
Sebi195g00043 | 270 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 1 | 54 | IPR017930 | - | |
Sebi195g00043 | 270 | ProSiteProfiles | Myb-like domain profile. | 10 | 50 | IPR001005 | - | |
Sebi195g00043 | 270 | Pfam | Myb-like DNA-binding domain | 10 | 49 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi195g00043 | Sebi-Chr195 | 574456 | 575514 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi195g00043 | 3 | 270 | MYB Transcription Factor Family | AT3G09230 | 46.595 | 1.51e-76 | 236 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Sebi195g00043 | Myb_DNA-binding | 5.7e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi195g00043 | K09422 | - | gmx:100813406 | 428.713 |