Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi195g00043 ATGACTTTTCTGCAATCTGCAGCTAAAAAAGAGGAGGACCGGATCATAGTTGCTGCTCATGCAATCCATGGTAACAAATGGGCAGCCATAGCCAGGTGTCTACCTGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCTACTTTGAGGCGTCGGGGAGTTGAACTTGATAAGATTAAGTTAGAATCTGGTAATACAGTGGAAGATTTTAGCTTGGACAAAGTCAAAGCATCATCGGAAGACACACTATCATGTGATGTTAATTCCTTGAAATCCTCAGAAGGAAGAGATGTCAGTTCTATGGAAATCATGGATGATAAATATAAAGACAGAGCTCAGACTGAGGGTCAATTAAACCATGAAGTCAAGGATCTGCCTACCCTTTTTCGGCCAGTAGCACGTGTAAGTGCTTTTAGTGTATATCAGTCTTTCAATGGTTCACAGCCTTCAACATCAATTCCAAGACCTGTTCCAATGCAAGGGCCCATTTTACAATCATCAAAACCAGATCTTGAATTTTATAAAATGTTCGAAGGAATTTATGGTGACCAGTCAGTGCCTCACCAGTGTGGCCATGGATGCTGTGCTGCTCCAAATGGTCAAATCTCTGAAAGCTCTTTGTTGGGACCAGAATTCATCGAATTTTCAGAACCTCCATCTTTCCCAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTAGAGAATAGTAGCGTCAAAATGATGGGTGACACCGCTGGCAGGGTGATGTCTAAAGGATCTCATGTACATATTGGCCATTAG 813 0.417 MTFLQSAAKKEEDRIIVAAHAIHGNKWAAIARCLPGRTDNAIKNHWNSTLRRRGVELDKIKLESGNTVEDFSLDKVKASSEDTLSCDVNSLKSSEGRDVSSMEIMDDKYKDRAQTEGQLNHEVKDLPTLFRPVARVSAFSVYQSFNGSQPSTSIPRPVPMQGPILQSSKPDLEFYKMFEGIYGDQSVPHQCGHGCCAAPNGQISESSLLGPEFIEFSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVMSKGSHVHIGH 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi195g00043 270 CDD SANT 10 50 IPR001005 -
Sebi195g00043 270 PANTHER MYB PROTEIN-RELATED 9 109 - -
Sebi195g00043 270 SMART sant 4 52 IPR001005 -
Sebi195g00043 270 SUPERFAMILY Homeodomain-like 10 52 IPR009057 -
Sebi195g00043 270 Gene3D - 9 53 - -
Sebi195g00043 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Sebi195g00043 270 ProSiteProfiles Myb-like domain profile. 10 50 IPR001005 -
Sebi195g00043 270 Pfam Myb-like DNA-binding domain 10 49 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi195g00043 Sebi-Chr195 574456 575514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi195g00043 3 270 MYB Transcription Factor Family AT3G09230 46.595 1.51e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi195g00043 Myb_DNA-binding 5.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi195g00043 K09422 - gmx:100813406 428.713