Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi195g00030 ATGGATCCTCCTTTTTCTTGTAACCTCAAAACAGAAGAAGCGAGGGACGAGCTCCGCTATGATTTTCCTCCTCCATCTACTCTGCGGCATCTGAAGGAGAAAGCATCTCAGATTGATACCAAGAAAACTCACATTCTCAGCATTGATGGCGGAGGAACCATCGCTATTGTCATAAGCGATACTCTCGTCCATCTCGAGGATCAGATCCGTCTCCAGACGTCTGTTCCCCACGCTCTCATTGTCTCTGGCCAATGCAGGAATCAAATCGATTCCGATCGTCGGACCCTCACCTTTCCCAGCCACATTATTAATCAAATCGGAATCGATTTGAGGACGACTTACTCTTGCTTTGAACGCTTGATCGACGATGCAGCCAAGAACCAGGCCGCTATGTACCTAACCAACACTGTTTTTGATGCTAAGCGTTTGATCGGAAGGCGTTTCAACGATTCTTTCATCGATTCTTCGGTACAGAGTGACATGAAATTGTGGCTATTTAAAGTAAATGTTGGTGTTGGTGATAATCCTATGATTGTGGTTAATTACAAGGGGGGAGGAGGATCAGTTTTCTGCAGAAGAGATATCTTCCATGGTTCTTATGAAGATGAAGGGGATTGCAAGTTCACCTGA 630 0.4524 MDPPFSCNLKTEEARDELRYDFPPPSTLRHLKEKASQIDTKKTHILSIDGGGTIAIVISDTLVHLEDQIRLQTSVPHALIVSGQCRNQIDSDRRTLTFPSHIINQIGIDLRTTYSCFERLIDDAAKNQAAMYLTNTVFDAKRLIGRRFNDSFIDSSVQSDMKLWLFKVNVGVGDNPMIVVNYKGGGGSVFCRRDIFHGSYEDEGDCKFT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi195g00030 209 PANTHER HEAT SHOCK PROTEIN 70KDA 106 190 IPR013126 GO:0005524|GO:0140662
Sebi195g00030 209 Pfam Hsp70 protein 117 184 IPR013126 GO:0005524|GO:0140662
Sebi195g00030 209 Gene3D - 138 192 - -
Sebi195g00030 209 FunFam heat shock 70 kDa protein-like 138 190 - -
Sebi195g00030 209 SUPERFAMILY Actin-like ATPase domain 106 189 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi195g00030 Sebi-Chr195 382724 383439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi195g00030 106 184 Calmodulin-binding Proteins AT5G02500 53.704 3.51e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi195g00030 K03283 - cit:102609521 101.679