Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi195g00004 ATGGCAGTCACATTCTACGACCTTAGCTCTGATTTTGGGTTGAAAAAGCTTGATGAGTACCTTCTCTCCCGCAGTTATATCACTGGGTACCAAGCTTCAAAGGATGATGTTACTGTATATGCAGCTTTGCCAAAGGTTCCATCAGATGAATATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATTTCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTGGAGGGATCTTCTCTCGTGGCAGAGACTTTTGCCACTCCCCCAGCTGCTGACACAAAGGCAAAGACTGAGGAAGAGAAGAAGGCAGCAGAAGAACGGGCAGCTGCTGTGAAGGCAGCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTCAGATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAACTCCAAATTATGCTTACTATTGTGGATGATCTAGTGTCTGTCGACAATCTTATTGAGGAATATCTTACAGTTGAGCCCATCAATGAACATGTCCAGAGTTGTGACATTGTGGCCTTCAATAAAATATGGATACTACTACCCTGA 663 0.4434 MAVTFYDLSSDFGLKKLDEYLLSRSYITGYQASKDDVTVYAALPKVPSDEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSSLVAETFATPPAADTKAKTEEEKKAAEERAAAVKAAGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKIWILLP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi195g00004 220 SMART EF1_GNE_2 126 215 IPR014038 GO:0003746|GO:0006414
Sebi195g00004 220 FunFam Elongation factor 1-delta 1 3 78 - -
Sebi195g00004 220 SUPERFAMILY eEF-1beta-like 123 215 IPR036219 -
Sebi195g00004 220 SUPERFAMILY GST C-terminal domain-like 13 67 IPR036282 -
Sebi195g00004 220 CDD EF1B 124 215 IPR014038 GO:0003746|GO:0006414
Sebi195g00004 220 Gene3D - 4 78 - -
Sebi195g00004 220 Coils Coil 98 118 - -
Sebi195g00004 220 FunFam Elongation factor 1-beta 1 like 120 215 - -
Sebi195g00004 220 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 204 215 IPR001326 GO:0003746|GO:0005853|GO:0006414
Sebi195g00004 220 Pfam EF-1 guanine nucleotide exchange domain 128 215 IPR014038 GO:0003746|GO:0006414
Sebi195g00004 220 Gene3D - 119 215 IPR014717 -
Sebi195g00004 220 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi195g00004 Sebi-Chr195 75927 77626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi195g00004 5 215 Eukaryotic Initiation Factors Gene Family AT2G18110 74.561 2.32e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi195g00004 K03232 - sind:105166169 301.212