Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi194g00041 GGAAGGAGAAACAAAAAGCTTTTCTGGTTGCCTGCTATTTCTCCTCTTCTATCAGTTATTCTGTCAACTTTAATTGTGTATTTGTCAAGAGCTGATAAAGATGGGGTTAATATACTAAAGCATGTCAAAGGAGGCCTGAATCCAAGTTCAGTTCACCAGTTGGAATTCCATGGTCAACATGTTGGACAAGCAGCCAAAATTGGATTGATTTGTGCAGTTATTGCACTCACTGAAGCAATTGCTGTTGGTAGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGCAATAAAGAAATGTTATCATTGGGACTTACAAACATTGCAGGATCTTTAACTTCATGCTATGTAGCAACTGGTTCTTTCTCAAGGACAGCTGTAAATTTCAGTGCAGGGTGTCAAACTGCAATATCAAATGTTGTGATGGCCATTACTGTGCTTTTGTCCCTAGAATTATTTTCAAGGCTCTTATACTACACCCCTGTGGCTATTCTTGCTTCTATTATCCTCTCTGCACTTCCTGGATTAATTAACATAAATGAGGCTTGCTACATCTGGAAGGTTGACAAATTAGACTTCCTTGCCTGTATTGGTGCTTTCCTTGGTGTCTTGTTTGCATCTGTAGAGACTGGTCTTCTTGTTGCAGTGATAATCTCGTTTGGGAAGATACTAATACAATCAATTCGACCTGGAGTAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCTTTTTGTGATGTTACTCAATATCCCATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCCAATTTTGTTAGAGAAAGAATACTGAAGTGGGTCATGGAAGAAGGAGATGGGCTTCAAGAATCTACTAAAGGAAACGTAAAAGCAGTTATTCTAGACATGACAAACCTGATGAATGTTGATACTTCCGGAATTCTAGCACTTGAGGAACTGCACAAGAGGTTGCTTTCACGCGGCGTAGAATTAGCTATGGTAAACCCAAGGTGGCTAGTAATTCACAAGCTTAAGGTTGCACACTTTGTGGACAAAATTGGAAAAGAATGGGTTTTCCTTACTGTTGGAGAAGCCGTAGACGCATGTCTCTCTTCTAAAATTTCCACCGCTTGA 1146 0.4023 GRRNKKLFWLPAISPLLSVILSTLIVYLSRADKDGVNILKHVKGGLNPSSVHQLEFHGQHVGQAAKIGLICAVIALTEAIAVGRSFASIKGYHLDGNKEMLSLGLTNIAGSLTSCYVATGSFSRTAVNFSAGCQTAISNVVMAITVLLSLELFSRLLYYTPVAILASIILSALPGLININEACYIWKVDKLDFLACIGAFLGVLFASVETGLLVAVIISFGKILIQSIRPGVEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFVRERILKWVMEEGDGLQESTKGNVKAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKVAHFVDKIGKEWVFLTVGEAVDACLSSKISTA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi194g00041 381 SUPERFAMILY SpoIIaa-like 256 373 IPR036513 -
Sebi194g00041 381 Gene3D STAS domain 229 376 IPR036513 -
Sebi194g00041 381 ProSiteProfiles STAS domain profile. 266 373 IPR002645 -
Sebi194g00041 381 PANTHER SULFATE TRANSPORTER 5 374 IPR001902 GO:0016020|GO:0055085
Sebi194g00041 381 Pfam STAS domain 250 369 IPR002645 -
Sebi194g00041 381 CDD STAS_SulP_like_sulfate_transporter 250 366 - -
Sebi194g00041 381 FunFam Sulfate transporter 31 229 376 - -
Sebi194g00041 381 Pfam Sulfate permease family 3 197 IPR011547 GO:0016020
Sebi194g00041 381 NCBIfam sulfate permease 2 369 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi194g00041 Sebi-Chr194 1438635 1442035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi194g00041 1 378 Inorganic Solute Cotransporters AT5G10180 64.136 4.56e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi194g00041 K17469 - gmx:100776591 681.789