Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi194g00031 ATGGATAAAGCAGATTTGAATAATTCTGACTCGGGGAAATTAAAAAATTCTAAATCGAGTGATAAAGATAATGGTCGTAGTCAAAACTTACCAGAAGGTTACAAAAGGATTAATGAACTAGCAGTTGATGATATTAAGGGTCTTGAATTTGATTCGGAAGAGGATGCATATGATTTCTATTCTAAGTATGCAAAATTTAACGGATTCGCTGTTAGGAAAGATGATGTTTATCGGGATAGCAATAATTTGATTAGAATGAGGCAAATGGTGTGTAACAGGCAAGGGGAGAGAAGTGAAAAACATTTAAATAGGACTGATAGAATTAGGGAGGCAAAGGCTATTAGACGTACTAAATGTCATGCAATGTTTAATAAAATTCCGAAAATTGTGGTAACTGATGAGGATGGTGCAATGCGTGAAGCTATAAGGACTATTTTTCCAGGTGCACTTCAAAGATTGTGCTCATGGCACCTTCATCAAAATGCATGTGAAAATGTGAAGAATCTCAAGTTTCTGGAGGATTTTAAGTCTCTTGTATATGGAAATTTCAGTATAGCGAAGTTTGAGGATGAGTGGAAGAAGGTCATTGACAATCATGGTCTAAACAATAATAAATGGGTCAGTAAAGTCTATGATTTGAGGAGGATGTGGGCCACTGCATACCTGAGGGATACCTTTTTTGGTGGAATAAGGACAATTTCAATTTGTGAAGGGATTAATTCCTTTATTAAGAGGCACAATGAGTTAATGTCTGATTTTAAGTCTTTGTACACTAATCCGGTTTTGACAACAGCTTTGCAAAAGTATGAAGTTGATGCTGCTAAGATCTTCACCAGAAATAAGTTCTTTGATGTAAGAAAGCAAATTGAGAAAATAGCAACATTGAATATGATTGATAGATCAGAAGTTGGAACTGAAGTTAGACTGAAAATAAATATGTTTGGAAGTCCAGATTGTGTATATTTGTGTTGTGTGATAAGGCTAATGCATGAGCAAGTTGAATCCCTTCCCTCAAATTTGGTCTGTAAAGGATGGACAAAGTATGCAAAAGTTCAGAACATATTTGATGTATATGGTGAAGAAGATGACTCATCAAAAAAGGATTTGTTGAGGTCTGGTGCTATATCTGCAGCCTGTAATAGGCATAGGAATGTAGTAGATAATAGACCATACCACTTTGTAAGAAACATTGAAAGAATTCACAACTTGGCTGATGAAGTTGAAAGGGAGGATGGTGGTGAAATTAAAAATGGAGATATATCAAGATTGTTCGTGATCCAACCATAG 1287 0.3543 MDKADLNNSDSGKLKNSKSSDKDNGRSQNLPEGYKRINELAVDDIKGLEFDSEEDAYDFYSKYAKFNGFAVRKDDVYRDSNNLIRMRQMVCNRQGERSEKHLNRTDRIREAKAIRRTKCHAMFNKIPKIVVTDEDGAMREAIRTIFPGALQRLCSWHLHQNACENVKNLKFLEDFKSLVYGNFSIAKFEDEWKKVIDNHGLNNNKWVSKVYDLRRMWATAYLRDTFFGGIRTISICEGINSFIKRHNELMSDFKSLYTNPVLTTALQKYEVDAAKIFTRNKFFDVRKQIEKIATLNMIDRSEVGTEVRLKINMFGSPDCVYLCCVIRLMHEQVESLPSNLVCKGWTKYAKVQNIFDVYGEEDDSSKKDLLRSGAISAACNRHRNVVDNRPYHFVRNIERIHNLADEVEREDGGEIKNGDISRLFVIQP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi194g00031 428 Pfam MULE transposase domain 122 161 IPR018289 -
Sebi194g00031 428 Pfam FAR1 DNA-binding domain 58 123 IPR004330 -
Sebi194g00031 428 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 107 IPR031052 GO:0006355
Sebi194g00031 428 MobiDBLite consensus disorder prediction 1 22 - -
Sebi194g00031 428 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi194g00031 Sebi-Chr194 1206078 1208117 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi194g00031 FAR1 5.4e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi194g00031 - - vvo:131629359 287.345