Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi194g00016 ATGGATAATACATATGATGTTTTGGTTGTTAAGTTGGATGATGAGAATGACCCTAGTTATGATGTTGGTCATCATGAAAGTATTAGTGCAGATCCCTCAGATAATAGAGAACAGAGCCAGCCTGCAGATATGGATGTTGGAGATGGGCAGTATAAGAGGATAGCAAATCTGACCGGTGATGATGTAAGGGGTTTGGAGTTTGTAACTCAGCATGCTGCTTTCAAATTTTACGAGGAATATGCTAAAGCCCATGGTTTTGTAGTAAGAAAAGATGATATAAGGAAGGATTTTAGGGGTAACATTATGATGCGACAATTTGTATGCAATAGACAAGGATTGAGAAACAAAAAGCATTTCTTGAGGGTAGATAGGAAAAGGGAGCACAAAGCAATTACCCAAACAAATTGTGCAACTAAGCTTCGGGTACGTTTCAATCGCAAGAAATCAAAATGGATAGTGGTGTCTTTTGAGGAGGCACATAATCACGAGCTAACCCCTTTAGTATATGTGCATTTATATCCTGCTTATCGTAAAATGAGTGATGAAGATAAAGCTCAGGTTGATAGTTTACGTGCCCATGGTATTAGAACTTGTCACATTATTGGCTACATGTTGGCCCAAAAAGGCGAATATGGTTGTTTAGGTTTTTGTAGAACAGATGTATACAACTATATTGACAGCAAAAGTCGTGAGCAAGTAAAAGATGGTGATGCAATTGTTGCTTTAAGCTATTTAGTAGGTAAGGCACAACATGATCCAACATTATTTGCACAATTCCAAATCACAACAAAAGGTAAATTAAGACATATATTTTGGGCAGATGGAACTAGTATATCCGATTATCAATGTAGCATTGTTGAATTCATGCATAGCTTTGAACAAGATTTGAGGGAATACAGACACAATGAATTGACTGCGGATTTTAAGTCATTGTTTTCTGAACCAGTATTGACAACATGTTTTCAGAAAATTGAGAGAGACGCTTCAAATATTTACACTTTGGAGATGTTTAAAGAAGTTAGGTAG 1026 0.3665 MDNTYDVLVVKLDDENDPSYDVGHHESISADPSDNREQSQPADMDVGDGQYKRIANLTGDDVRGLEFVTQHAAFKFYEEYAKAHGFVVRKDDIRKDFRGNIMMRQFVCNRQGLRNKKHFLRVDRKREHKAITQTNCATKLRVRFNRKKSKWIVVSFEEAHNHELTPLVYVHLYPAYRKMSDEDKAQVDSLRAHGIRTCHIIGYMLAQKGEYGCLGFCRTDVYNYIDSKSREQVKDGDAIVALSYLVGKAQHDPTLFAQFQITTKGKLRHIFWADGTSISDYQCSIVEFMHSFEQDLREYRHNELTADFKSLFSEPVLTTCFQKIERDASNIYTLEMFKEVR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi194g00016 341 MobiDBLite consensus disorder prediction 15 32 - -
Sebi194g00016 341 MobiDBLite consensus disorder prediction 15 48 - -
Sebi194g00016 341 PANTHER OS01G0519700 PROTEIN 282 341 - -
Sebi194g00016 341 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi194g00016 Sebi-Chr194 640858 641883 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi194g00016 FAR1 2.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi194g00016 - - ccaj:109792835 329.717