Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi193g00074 ATGCATAATATTGATCAAACCTTGAGAGAATACAGAAATAATGAACTCATTGCATATTACAAGTCATTATTCTCAGAACCTGTGTTGACTACACCATTATATAAGATTGAGAAAGATGCAGCTAAAACCTACACTCAAGAAATTTTTAAAGAAGTGAAGCGTGAGATTGAAAAGGCAGGTGCACTAAATGTTATTGAGCGAAGTGTAAGTGGTGAGAAGTTGTTCAAGCTGAGTGAGTATTGCAACCATGGCTGTGCAGTGTTATCGAAAAAAAAGAGGACAATTTTCAATGATTTGATGGATGATGTATTCAATGTTGTTGAGAAGTATGAGAAGATAGTGGGTCAAGAAAGTTCTGAAAGATCATCAGTTAAAGTTAAAGAGGTTCGTGATCCAACTATTGTGAAAACCAAAGGTGCTCCTAAGAGGAAAAAATTTGCCATGAGGAGGAAGAAGTATTGCTCAAATTGTACTAGTACAGGACACACAATTAGGAGATGTCCAATGCGCAACGGATTAAATGCTATGAGTAAGAAGGATCTTGAGAAGTTGTCTTCAGACTCTTCTGACACATGCAAAGACCTTGATAGTGATAAGGAATCATTGCTGAATGAAGGGTTTGGGGATGGTGACAATGTTGACACTGAAGCGATCGAAAGCCAAAATGTGAAAAAAGGGAAGGATAAAGCTGGGTATTCGTCTAAAAGAAAGAAAACAAAAGTAATAGGTGCAACTCAGGAACCACTGATTAGAGGGTCTGAGGATGGAGACAATGATCACCCCAAAGACATTGGAAGCCAAAATGTCAAAAAAGGGAAGGATAAAGTTGATGAATCTTCTAAAAGGAAGAAAACAAATGTGTATGGGAAGACACATGAATCAAGGAAGAATGGCCAACTGCATGTTTACCATCATAATTCAAATATTCATGGTGGCAATCAGGTTCCACAGTTGTTGTCCTTTGGACTAGATCAGAACACCCAACGCAAAAATAATGACACCACTCAGCAAAGATTGAATCAGCTCAAGGAATCCTTATCAGAAATCTTGACTCACTTTTACCCCTTCGCTGGAAGGATCAAAGACAATCTTTCCATAGATTGTAATGATGAAGGGGTTCACTACGTGGAGGCCAAAGCAAGCTACAATCTTGTTGAATTTTTAAACCAATCAAATTTCTCTTCATTTATACACAAACTCCTTCCAAGTCAACCCACATGGGAACAAGAACCAACTGAAGGATATGTGACTATGATACAAGTGACATGCTTTGCATGCGGTGGCATAGTGATTGGTGCCTTAGTGTCTCATATGGTAGCAGATGGAGCTGGTGCTAGCTTCTTTTTGAAGAGTTGGGGTGCTACTTCTCGCAGGGAATTTCCATATACATTCCCAAAATTTGATTCCCCTTTCAGTGATGCAATGTCAAAAGATGTAAACGTGATGGCTCTGTGTGGCCAATTCTTGAATAAAGGTAGACTTGGTATGAGGAGATTTTTGTTTGATGCAGAAGCTATTTCTAAGCTAAAAGCCAAAGGTTCTAATTCAACAGTGCAAAATCCTACTCGAGTGGAGGTAGTATCATCCCTCATATGCAAATGTGCCTCAGAAGCTTTCAAGGCAAACTCTGGTTTGGAGAGGCCAACTCTGTTAACACATGCTGTGAATATGCGTCCAAGGGCAAATCCTGCTTTTCTAGAATCTTGTATGGGTAATTTCGTTTGGACAACTTCTGCTCTATTGAGTAAAAAAGAGTTACCTGAATTGGTGGTTGAATTGAGGGAAGCAGTGATGGGGATTAACTCAGATTTTGTGAAAGGCTTTGAAGGTGAAGGAGGGTATGTAAGGTACAATGAGGTTTTAACAGAGATGGTTGAGAAAGCCTCGAGTGTTGCACTGACTAGTGGGGTGAATTTCGTTCATTGTACAAGTTGGTGTAATTTTGGTCTTTATGATGTTGATTATGGATGGGGAAAACCAACTTGGGTGTCTTGCACAACTACTTCCCCTGAAGTTGATGCTGTTTTTTTCAACTTGGTCCTCCTAATGGATACACCATCAGGAAATGGAATAGAAGCTTGGATTTATTTAAATGATGATGATATGACTGTATTGCAACAGGACAAGGAGCTCCTTGCTTTTGCACCTTAG 2151 0.3938 MHNIDQTLREYRNNELIAYYKSLFSEPVLTTPLYKIEKDAAKTYTQEIFKEVKREIEKAGALNVIERSVSGEKLFKLSEYCNHGCAVLSKKKRTIFNDLMDDVFNVVEKYEKIVGQESSERSSVKVKEVRDPTIVKTKGAPKRKKFAMRRKKYCSNCTSTGHTIRRCPMRNGLNAMSKKDLEKLSSDSSDTCKDLDSDKESLLNEGFGDGDNVDTEAIESQNVKKGKDKAGYSSKRKKTKVIGATQEPLIRGSEDGDNDHPKDIGSQNVKKGKDKVDESSKRKKTNVYGKTHESRKNGQLHVYHHNSNIHGGNQVPQLLSFGLDQNTQRKNNDTTQQRLNQLKESLSEILTHFYPFAGRIKDNLSIDCNDEGVHYVEAKASYNLVEFLNQSNFSSFIHKLLPSQPTWEQEPTEGYVTMIQVTCFACGGIVIGALVSHMVADGAGASFFLKSWGATSRREFPYTFPKFDSPFSDAMSKDVNVMALCGQFLNKGRLGMRRFLFDAEAISKLKAKGSNSTVQNPTRVEVVSSLICKCASEAFKANSGLERPTLLTHAVNMRPRANPAFLESCMGNFVWTTSALLSKKELPELVVELREAVMGINSDFVKGFEGEGGYVRYNEVLTEMVEKASSVALTSGVNFVHCTSWCNFGLYDVDYGWGKPTWVSCTTTSPEVDAVFFNLVLLMDTPSGNGIEAWIYLNDDDMTVLQQDKELLAFAP 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi193g00074 716 Gene3D - 494 713 IPR023213 -
Sebi193g00074 716 Gene3D - 307 480 IPR023213 -
Sebi193g00074 716 MobiDBLite consensus disorder prediction 220 298 - -
Sebi193g00074 716 PANTHER F21J9.9 325 715 - -
Sebi193g00074 716 MobiDBLite consensus disorder prediction 252 298 - -
Sebi193g00074 716 Pfam Transferase family 330 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi193g00074 Sebi-Chr193 1453079 1458244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi193g00074 342 707 Monolignol Biosynthesis Gene Families AT5G48930 24.138 3.95e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi193g00074 - - gmx:100792475 541.962