Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi193g00057 ATGGAGAAGACAAGAGCGGTAGTGTTATCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTTGGAGAAGGGACATATGGGAAGGTGTACAGGGCAAGAGAAAAGGCAACTGGGAAGATCGTTGCTCTCAAGAAGACTCGCCTCCATGAAGACGAAGAAGGTGTCCCTCCCACCACTCTTCGTGAAGTTTCCATTCTGCGAATGCTCTCCCGCGATCCCCATGTCGTCAAGTTAATGGATGTGAAACAGGGTCAGAACAAGGAAGGGAAGACGGTGCTCTACTTGGTCTTTGAGTACATGGACACCGATCTCAAGAAATACATTCGCAGTTTCCGTCAAACCGGAGAAAACATTCCACCCAAAACTGTCAAAAGCTTGATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCACGGCCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGAAAAACAATGATGCTTAAAATAGCTGATCTTGGACTTGCTCGAGCATATACTGTGCCAATTAAGAAGTACACACATGAGATACTAACCCTGTGGTATAGAGCTCCTGAAGTCCTTATGGGAGCTACCCATTACTCAATGGCAGTGGATATGTGGTCTGTTGCCTGCATATTTGCTGAACTTGTCACCAAGCAAGCACTCTTTCCTGGTGATTCTGAGCTGCAACAACTCCTTCATATATTCAGGCTGTTGGGCACTCCTAATGAAGAGGTGTGGCCAGGCGTTAGTAAACTAATGAACTGGCATGAATACCCCCAGTGGAGACCTCAGAGTCTGTCAACTGCTGTACCAACTTTGGATGAGCTTGGACTTGATCTACTATCTCGGATTTCTGCGAAGAAAGCTATGGAACACCCTTACTTTGATGACCTGGACAAGACCTATCTTTAG 915 0.4689 MEKTRAVVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVKLMDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFRQTGENIPPKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAYTVPIKKYTHEILTLWYRAPEVLMGATHYSMAVDMWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWRPQSLSTAVPTLDELGLDLLSRISAKKAMEHPYFDDLDKTYL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi193g00057 304 PANTHER CELL DIVISION PROTEIN KINASE 13 297 - -
Sebi193g00057 304 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Sebi193g00057 304 Pfam Protein kinase domain 15 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi193g00057 304 PIRSF ILK 3 293 - -
Sebi193g00057 304 ProSiteProfiles Protein kinase domain profile. 15 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi193g00057 304 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Sebi193g00057 304 SMART serkin_6 15 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi193g00057 304 SUPERFAMILY Protein kinase-like (PK-like) 12 300 IPR011009 -
Sebi193g00057 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Sebi193g00057 304 FunFam Cyclin-dependent kinase B2,2 11 101 - -
Sebi193g00057 304 Gene3D Transferase(Phosphotransferase) domain 1 102 303 - -
Sebi193g00057 304 FunFam Cyclin-dependent kinase 2 103 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi193g00057 Sebi-Chr193 1116500 1118089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi193g00057 8 304 Core Cell Cycle Gene Families AT1G20930 84.691 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Sebi193g00057 Pkinase 9.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi193g00057 K07760 - gmx:100808302 571.237