Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi193g00056 ATGGTTTCGCTGCATCCACTAGTGTGTCCACCTTTCTCAGTTTCTTCTTCCTCCTCCTCCTTCATTAGCGGCGATCTTCAGTTTCGCATTAGCTTTCCCCCAAAACCGAAAAGCAGCTTCACTACAAAACATCCTTCTTTCTCCTGCAATGCTTCATGGCAAGAGCTTGCGGGAGTTTTTGTATTCTCAGCGATTCCTTTCACCGCCGTGAAAGCTATAGCTAATAGTCCTCTAGGAGAATCGCTTCAGAGGAAAATGGAGGAGAGAAAGAAATTTGCTGTAGAAAACTCCTCCAAATTCAAAGCTGCAGCCGAGAAGGCCAGAAAGGAGAGCTTTTGGTATGGCGAAGATCGGCCTCGTTGGCTTGGTCCTATTTCATATGGCTACCCATCATATCTTACTGGGAAATTGCCTGGGGATTATGGCTTTGACATTGCTGGGCTTGGAAAGGATCCTGTGGCACTGCAGAAATACTTCAACTTTGAGATATTGCATGCTCGGTGGGCAATGCTTGCATCCGTTGGTGCTCTAATTCCTGAATTGTTAGACCTAATGGGAGCCGTTCACTTTGTAGAACCTGTCTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTTGATTACCTTGGCATCCCAGGTCTTCACTTAGCTGGAAGCCAGGGAGTGGTTGTGATTGCTATTTGCCAAGTACTCCTTATGGTTGGACCAGAATACGCTAGATACTGTGGGATTGAGGCATTGGAGCCTCTTGGAATATATCTTCCTGGTGATATAAATTATCCTGGAGGAGCATTGTTTGATCCCTTAAATTTGTCCGAAGATCCTGAAGCTTTTGAAGATCTGAAGGTGAAAGAAATAAAAAATGGACGCTTAGCAATGATTGCCTGGTTAGGCTTTTACATACAAGCAGCTCTGACGGGTAAAGGTCCTGTGCAGAATCTCCTGGATCACATCTCCGATCCTTTCCACAACAACTTGCTGGGCTTACTGCCTCACTAA 1005 0.4557 MVSLHPLVCPPFSVSSSSSSFISGDLQFRISFPPKPKSSFTTKHPSFSCNASWQELAGVFVFSAIPFTAVKAIANSPLGESLQRKMEERKKFAVENSSKFKAAAEKARKESFWYGEDRPRWLGPISYGYPSYLTGKLPGDYGFDIAGLGKDPVALQKYFNFEILHARWAMLASVGALIPELLDLMGAVHFVEPVWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVVVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSEDPEAFEDLKVKEIKNGRLAMIAWLGFYIQAALTGKGPVQNLLDHISDPFHNNLLGLLPH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi193g00056 334 Pfam Chlorophyll A-B binding protein 130 305 IPR022796 -
Sebi193g00056 334 FunFam Chlorophyll a-b binding protein, chloroplastic 120 332 - -
Sebi193g00056 334 Gene3D Chlorophyll a/b binding protein domain 120 331 - -
Sebi193g00056 334 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 91 329 IPR001344 GO:0009765|GO:0016020
Sebi193g00056 334 SUPERFAMILY Chlorophyll a-b binding protein 112 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi193g00056 Sebi-Chr193 1099815 1103799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi193g00056 35 332 Chloroplast and Mitochondria Gene Families AT1G76570 77.852 2.57e-179 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi193g00056 K14172 - gmx:100786260 546.584