Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi193g00048 ATGAAGAAGATCACCAGAATGAAGGATATACTGAACATGAAGAAGAAGCCCAACATGAAGAAGATTACCAGAATGAAGGATATATTGAACATGAAGAAGATCAAGATACTGAACAACAGGAAGAAAACCAGAATGAAGAAGAAGCCCAACATGAAGAAGATCAAGATACTTAACATAATGAACGGATTTGCAACCAAAAGATGGAAAATCATCTCTAGTAGGAAAACTGGGAGAGTTTTGCAACAAAATTTTTTTTGCAACAAAGAAGGTAAACGTGTAGACAGTGGTGTGCCTATGGAAGAACGTCAACGTGAGCCCAAAGCTGAGACTAGATGTTATTGTAGGGCAGAATTTCGAGCGCATGTGGACATCAACTCAGAACGGTGGTTTTGTTCTTATTTTTCTGATAAGCACAGCCACGAACTCTTAGATGCAATGTTTTGTGCAATGCTTCCTGCACATAGGAAGATGGTTGTTTGTGATATAGATCAGATGAATAACATGTTGAAGAAAGATATCTACAATCAAATTATCAAACAACGGCGGTTGCAAAATTCGGATGCAGAAGCAGCTGTAAAGTACTTGCATAACTTGGGAGTCAATGACCCTTTGATGTTTACTCGCCACACACTTGACCCAGATAACAGGCTTGAGCACTTGTTCTGGTGTGATGGTAAAAGCCAACTTGATTACAAAGTCTTTGGTGATGTACTGGCGTTTGATGCAACTTACGGTAAGAATAAGTATAGACTACCTCTAGTTGTTTTTTCCGGTGTGAATCACCATAATCGTACAACCATATTTGCCAGTGCAATAGTTGCCAATGAAACTGAGGAAACATACATTTGGCTACTGCGTCTGTTTTTAGAAGCAATGAAAGGTAAAATGCCTAACTCAGTCATAACTAATGGAGACCTTGCAATGAGGAATGCCATTAGAGTTGTGTTTCCAAGAGCTCATCACCGTTTGTGTGCTTGGCATCTAGCTCGTAATGCGACCTCTAATGTTGGAATCCCTGCCTTCATAAAAGGATTTGAACATTATAAGCCATGGATTATAGAGATGTATCAAAAGAGGGAAATGTGGGCTGCAACATACATGAGGGGAAAATTTTTTGTAGGCTTCAGGACAACATCAAGGTGTGAAGAAATGGAAGATGACTTTTCCTCCATACATGGTGATCCAGTATTGCAAACCAATCTTCAAGGTCTTGAAAGAAAGTTGTCTGTTGTGAATTCTGAAACTATTGAGGATTTTAATGATGCGATGGAAAGGTCTTTAAAAGAACATGCAGAAAAAACGGCAAAGAGGGCATGTGATATGGCTAGTGGGAGTGAGCCGACGTTAAGTGATCATGAAAGATTGAGGAACCCTCTCCCCGCAAGGCACAAAGGATGCCCGAGAGCAAGCACTTCCACTGGAGGATTGAGGGTTAGGCGCACAACCAAGTGCTCCATCTGTCATGTGGCTGGCCATAATAAGGCTACATGCCCACAATGA 1500 0.408 MKKITRMKDILNMKKKPNMKKITRMKDILNMKKIKILNNRKKTRMKKKPNMKKIKILNIMNGFATKRWKIISSRKTGRVLQQNFFCNKEGKRVDSGVPMEERQREPKAETRCYCRAEFRAHVDINSERWFCSYFSDKHSHELLDAMFCAMLPAHRKMVVCDIDQMNNMLKKDIYNQIIKQRRLQNSDAEAAVKYLHNLGVNDPLMFTRHTLDPDNRLEHLFWCDGKSQLDYKVFGDVLAFDATYGKNKYRLPLVVFSGVNHHNRTTIFASAIVANETEETYIWLLRLFLEAMKGKMPNSVITNGDLAMRNAIRVVFPRAHHRLCAWHLARNATSNVGIPAFIKGFEHYKPWIIEMYQKREMWAATYMRGKFFVGFRTTSRCEEMEDDFSSIHGDPVLQTNLQGLERKLSVVNSETIEDFNDAMERSLKEHAEKTAKRACDMASGSEPTLSDHERLRNPLPARHKGCPRASTSTGGLRVRRTTKCSICHVAGHNKATCPQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi193g00048 499 Pfam FAR1 DNA-binding domain 61 143 IPR004330 -
Sebi193g00048 499 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 433 IPR031052 GO:0006355
Sebi193g00048 499 MobiDBLite consensus disorder prediction 438 474 - -
Sebi193g00048 499 Pfam MULE transposase domain 237 331 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi193g00048 Sebi-Chr193 866994 869275 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi193g00048 MULE 1.6e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi193g00048 - - tpra:123913749 406.757