Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi193g00045 ATGTCATATAAGGTAGCAGTCAAGGCTCATAATTGGAGGCTATGGTTCGAGGATGGAATGGTGGAGATGATGCAAATCTACAAATTAGAATCCCCAGTTCTAATCCACTACAAATACACGGACAGTGATTACTTATTGCTAAGAATTTGGCAAAAAATAGGTAGAGGAGAGGTTCAGTACCCAAAGCCAGTGGAAGAACCACAAGAAATCATACATATCGATGACGACGAAGAAGAAGTCCCAAGTGCAGCTAGTCAAATCCTCTGGAAAAGTGTTCTCACTAAGGCACAAGAGGAAAGCAGACAAGGCTTGGTTCTGCCAGTCTCAATAGTAACGGAATTACTACACAAGAACCAAAAGGTTTTTCCAGTGAAAGTGCCTAGTGGAGAGGTCCAGCCATGGGCCCTACTATGGAACAAAAAAATTGAAAAACATTGTCGTCTTAGCCAAGGGTGGTACCAATTCTGCAGGACAGCTAGACTTAAAGCAGGTGATGAGCTTACTTTCTGGAAATTTGAAGGTGCAGAATACATCGGACTCCAAGTTAAAACTGCAAGGAATTAG 564 0.422 MSYKVAVKAHNWRLWFEDGMVEMMQIYKLESPVLIHYKYTDSDYLLLRIWQKIGRGEVQYPKPVEEPQEIIHIDDDEEEVPSAASQILWKSVLTKAQEESRQGLVLPVSIVTELLHKNQKVFPVKVPSGEVQPWALLWNKKIEKHCRLSQGWYQFCRTARLKAGDELTFWKFEGAEYIGLQVKTARN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi193g00045 187 CDD B3_DNA 92 174 IPR003340 GO:0003677
Sebi193g00045 187 SUPERFAMILY DNA-binding pseudobarrel domain 89 175 IPR015300 -
Sebi193g00045 187 ProSiteProfiles B3 DNA-binding domain profile. 89 186 IPR003340 GO:0003677
Sebi193g00045 187 Gene3D - 76 187 IPR015300 -
Sebi193g00045 187 Pfam B3 DNA binding domain 91 170 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi193g00045 Sebi-Chr193 851124 851794 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi193g00045 B3 8.7e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi193g00045 - K23114 cave:132178695 40.0466