Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi193g00034 ATGGCTTCATCTCTGTTGTTTACAGTGCGGAGGCGTGAGCCGGTGCTTGTAGCTCCTGCGAAACCCACCCCTCGTGAAGTGAAACTACTCTCAGACATAGATGACCAAGAAGGCCTGCGTTTCCAAATTCCAGTGATACAGTTCTATCGCTATGATCCCTCAATGGCAGGGAAAGACCCTGTTGAGGTTATAAGAAAGGCACTGGCCAAGACACTTGTCTTTTACTATCCTTTTGCAGGTAGACTCAGGGAAGGGGCTGGTCGGAAACTGATGGTAGATTGTACTGGGGAGGGTGTTTTGTTCATTGAGGCAGATGCTGATGTTACGCTCAACCAATTTGGTGATGCTCTTCAACCTCCCTTCCCATGCTGGGAGGAGCTCCTTTACGATGTTCCTGGTTCTCAAGGAGTCCTTAACACTCCCTTGCTGGTTATACAGGTAACACGCCTCAAGTGCGGTGGTTTCATTTTTGCTCTACGGTTGAACCACACCATGAGTGATGCAGCTGGTTTGGTTTTATTCATGAGTGCCTTGGGCGAAATAGCTCGCGGGATGAACGGACCTTCAATCCCACCAGTTTGGCGCAGGGAGCTTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATACGAACAAGTACCAGATACCAAGGGAACCATCATCCCTTTAGACGACATGACCCATCGCTCTTTCTTCTTTGGTCCCAAAGAGGTATTCGCAATTCGTGGCCTCCTTCCTCCCCACCTTCGTCAATGCTCCAATTTTGAAATTCTCACCGCATGCCTCTGGCGTTGCCGCACAATAGCTTTGCAACCAGAGAGTGATGAGGAGGTTCGCATAATTTGTATTGTTAACGCAGGCGCCAAGTTTGATCCTCCATTACCGTCTGGTTACTATGGCAACGCTTTTGCATTTCCCGTTGCGGTTACAACTGCAAGGAAGCTGTTTGAAAATCCGTTGGGATATGCGCTGGAGTTAGTGAGGAAAGCAAAAGCTGACGTGACTCAAGAGTACATGCATTCGTTGGCAGATCTTATGGTCACCAATGGACGACCTCATTTTACTGTGGTAAGGTCCTACCTTGTGTCTGATGTGACACGTGCTGGGTTCGGAGAGGTCGATTTTGGGTGGGGGAAGCCTGTTTATGGAGGACCTGCCAAAGGAGGAGTTGGAGCCATACCTGGTGTGGCAAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGTTTAGTCATACCGGTTTGTTTACCATCAGATGCCATGGAGAGGTTCGTAAAAGAGTTGGATAACATGCTTAACAACCATGTCCATCCTGCTAAGCGTGGTTTTATCGTTTCTTCGTTGTAG 1365 0.4821 MASSLLFTVRRREPVLVAPAKPTPREVKLLSDIDDQEGLRFQIPVIQFYRYDPSMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVTLNQFGDALQPPFPCWEELLYDVPGSQGVLNTPLLVIQVTRLKCGGFIFALRLNHTMSDAAGLVLFMSALGEIARGMNGPSIPPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMTHRSFFFGPKEVFAIRGLLPPHLRQCSNFEILTACLWRCRTIALQPESDEEVRIICIVNAGAKFDPPLPSGYYGNAFAFPVAVTTARKLFENPLGYALELVRKAKADVTQEYMHSLADLMVTNGRPHFTVVRSYLVSDVTRAGFGEVDFGWGKPVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPSDAMERFVKELDNMLNNHVHPAKRGFIVSSL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi193g00034 454 Gene3D - 5 214 IPR023213 -
Sebi193g00034 454 PANTHER ACYL TRANSFERASE 4 7 438 - -
Sebi193g00034 454 Pfam Transferase family 12 435 - -
Sebi193g00034 454 Gene3D - 215 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi193g00034 Sebi-Chr193 695510 698512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi193g00034 9 434 Monolignol Biosynthesis Gene Families AT5G48930 29.888 3.26e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi193g00034 K19861 - gmx:100797017 801.971