Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi192g00065 ATGGTAGTGACTGGTAAAATGGGGATCCAAACTATGGGATCTCAAGGTGGTGGAGATAGTAATGGAAAACGGTCACAGTTCCAGCCTTTGGTGCGGCAAAACTCAATGTACAGTCTCACACTTGATGAGGTTCAGAGTCAATTAGGTGATTTAGGGAAGCCGCTAAGTAGTATGAATCTTGATGAGCTTTTAAAAAATGTATGGACTGTTGAGGCAAGCCAGTCCACAGGTATAGACAATGAGGGCACAGCACAAGCTAGTCAAGCTGCTCTGCAGCGTCAAGCTAGTCTGTCATTAACTGGTGCACTAAGCAAGAAGACTGTAGATGAGGTTTGGAGAGATATCCAACAAAACAAAGACAATGAGGAGAAGAAGTCACGAGACAGACAACATACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCCGAAGCATCTTCTAATAAAAGTGTAGCAGTACCACAGTTTCCTCCCCAAGGTCAGTGGATACAGTATGCACAACCACAATATCAGCATCCACAACAAAGTTTAATGGGGATTTATATGCCTAGCCAAGGTATAGCACAGCCATTACACATGGGGGCTGGTGCTTCATTGGATGTTCCATTTGCCGATAGTCAGGTAGCATTGCCTTCACCTCTAATGGGAACAGTGTCAGATACACAGACACCTGGAAGAAAAAGGAGCACTCCAGAGGACATGATGGAGAAGACTGTTGAGAGGAGGCAGAAAAGGATGATAAAAAATCGAGAATCTGCTGCTCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGCAAAAAGTGTCACGTTTGGAAGAGGAAAATGAAAGGCTGAGGAAACGAAAGGTTAGATTTTACTATGAAGTTTTACTTTAA 903 0.4319 MVVTGKMGIQTMGSQGGGDSNGKRSQFQPLVRQNSMYSLTLDEVQSQLGDLGKPLSSMNLDELLKNVWTVEASQSTGIDNEGTAQASQAALQRQASLSLTGALSKKTVDEVWRDIQQNKDNEEKKSRDRQHTLGEMTLEDFLVKAGIVAEASSNKSVAVPQFPPQGQWIQYAQPQYQHPQQSLMGIYMPSQGIAQPLHMGAGASLDVPFADSQVALPSPLMGTVSDTQTPGRKRSTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELEQKVSRLEEENERLRKRKVRFYYEVLL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi192g00065 300 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 290 IPR043452 GO:0003700|GO:0045893
Sebi192g00065 300 MobiDBLite consensus disorder prediction 218 244 - -
Sebi192g00065 300 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
Sebi192g00065 300 MobiDBLite consensus disorder prediction 1 27 - -
Sebi192g00065 300 Pfam bZIP transcription factor 247 290 IPR004827 GO:0003700|GO:0006355
Sebi192g00065 300 Gene3D - 245 294 - -
Sebi192g00065 300 CDD bZIP_plant_BZIP46 247 289 - -
Sebi192g00065 300 SUPERFAMILY Leucine zipper domain 247 291 IPR046347 GO:0003700|GO:0006355
Sebi192g00065 300 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Sebi192g00065 300 Coils Coil 263 297 - -
Sebi192g00065 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Sebi192g00065 300 SMART brlzneu 243 298 IPR004827 GO:0003700|GO:0006355
Sebi192g00065 300 MobiDBLite consensus disorder prediction 8 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi192g00065 Sebi-Chr192 1594000 1595005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi192g00065 28 291 bZIP Transcription Factor Family AT3G56850 55.160 8.56e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi192g00065 bZIP_1 4.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi192g00065 K14432 - gmx:100101875 442.965