Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi192g00062 ATGGATGGTGAGACAGTAGATGAAGGGGAAAACAGTGATAGACCTGCTTCTAAAACTGTTGAAACTGAAAATGGCCAAGTACAAGTTATGACTGTAAACTTGGCTGAAAGAGAAGTAAATAATCAGGATGGTGATGTGTATAGGAAACCACAGGTGGGCATGCAATTTGAATCTGAAGATGCTGCAAGATCATTTTATGATACATATGCAAGACATATAGGATTTAGCATCCATGTTGGTCAATTCAGTCGTTCTAAGCCTGATGGTCCAATCATAACTTGGGACTTTTCTTGTTCCAGGGAGGTACTGAAAAGGAAGAATGTAGTAAGTTGCAATGCAATGCTTAGGATAGAGAGAAAAGACGCAAACTGGATAGTGACAAAATTTGTTGAGGACCATAATCATTCCCTGGCTTCCTCTAAAAAGGTGCAGTACCTTCGACCCCATAGGCATTTTGCAGGTGCTACAAGAAATGTTACAGAGGCATTTGATGCCAGTAATGATTCCTATGTTTCTATGAATGGAAATCATTTAGAACCAATTAGTACAATTAGGAGTTCCTCTCCAGCTGACAAAAGTCATCCAACGAGAAACATTGGGTCCTTTGCCTATGAAAGATTGGCTCACATTTACCTTGCTCATCCTTCATTCTATGGGGAGCTGTATAGTTGCATAAATTTCTCCGAGACTGTTGAGGATTTTGAATCAACATGGAAGTCTCTTCTAGATAAATATGATCTCCAGAAAAATGATTGGCTTCTAGCAGTGTATAATGCTCGCAAACAATGGGCACCTGTTTACTTTCGTGATACTTTCTTTGCTACATTCACCTCAAACCATGGGTATGAACGATCTATTGAACATTCATTGGAAAAGGAAATAGAAGCAGATTACGAGACCATTTGTACCACACCTGTATTGAAGACTCCATCACCAATGGAACAACAAGCTGCAAATCTGTACACTAAAAAGATTTTTGCGAAGTTTCAGGAGGAGCTGGTGGAAACTTTTGTGTATACTGCGAATATTATTGAGGATGATGGGGTGGTCAGTAAATACAGGGTTGCAAAATATGAACATGATTACAAGGCATACATGGTCACATTAAATATCTCTGAACTGAAGGCGAATTGCAGCTGTCAGATGTTTGAATACTCAGGCATTCTTTGTCGGCATATATTGACTGTCTTCACTGTTACAAATGTTCTTACCCTTCCATCGCACTATATTTTGAAGCGATGGACAAGGAATGCGAAATCCAGTATCGGAACTGATGAAAAAATACCAGATTCACTTGACATTGAAAATCTCACTTTACGTTTTAGTAGTTTATGTCGAGAAGCCATTAAGCTTGCAGAAGAAGGGGCAATATCTATAGAGACTTATAATGCGGCAATGAATGCCTTTAGAGAGGGTGCTAAAAGGGTTGGTGTTGTGAAGAAAAATGTAGCAAAAGTTAGACCTCCAAGCACTCAGGGTAATGGAAGCAGTCAGGAAGACAATAACAAGAAGAGCCCTTCATCAATTTCTGAAGTCATGCCGTCATTGTGGCCTTGGCAAGATTCAGTGACACATCACTTTAATCTTAATGACATTGGGCTTCCTGTTACTGATCTGAATCATCCTAGTATGGCTCCTGTTTCTATTCATCGGGATGGTGGTCCACCAGATAACACTGTTGTCCTTACTTGTTTCAAGTCTATGACTTGGGTAATTGAAAATAATAATTCAAGTCCATCCAGTAAAGTTGCAGTGATCAACATAAAGCTGCAAGATTATGGCAAGAGCCCTTCAGGAGAGACAGAAGTGCAATTCAGGGTGACAAGGATCACTTTGGAGCCTATGTTGAGGTCTATGGCTAACATCAGCCAGCAGCTCACTACACCAGTCAATAGAGTTGCTGTCATCAGTCTGAAAGTATATAAACTTGGATTCATGATCCTCTACTCTTTCTAG 1956 0.3988 MDGETVDEGENSDRPASKTVETENGQVQVMTVNLAEREVNNQDGDVYRKPQVGMQFESEDAARSFYDTYARHIGFSIHVGQFSRSKPDGPIITWDFSCSREVLKRKNVVSCNAMLRIERKDANWIVTKFVEDHNHSLASSKKVQYLRPHRHFAGATRNVTEAFDASNDSYVSMNGNHLEPISTIRSSSPADKSHPTRNIGSFAYERLAHIYLAHPSFYGELYSCINFSETVEDFESTWKSLLDKYDLQKNDWLLAVYNARKQWAPVYFRDTFFATFTSNHGYERSIEHSLEKEIEADYETICTTPVLKTPSPMEQQAANLYTKKIFAKFQEELVETFVYTANIIEDDGVVSKYRVAKYEHDYKAYMVTLNISELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPSHYILKRWTRNAKSSIGTDEKIPDSLDIENLTLRFSSLCREAIKLAEEGAISIETYNAAMNAFREGAKRVGVVKKNVAKVRPPSTQGNGSSQEDNNKKSPSSISEVMPSLWPWQDSVTHHFNLNDIGLPVTDLNHPSMAPVSIHRDGGPPDNTVVLTCFKSMTWVIENNNSSPSSKVAVINIKLQDYGKSPSGETEVQFRVTRITLEPMLRSMANISQQLTTPVNRVAVISLKVYKLGFMILYSF 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi192g00062 651 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 476 IPR031052 GO:0006355
Sebi192g00062 651 SMART 26again6 376 403 IPR006564 GO:0008270
Sebi192g00062 651 MobiDBLite consensus disorder prediction 487 511 - -
Sebi192g00062 651 MobiDBLite consensus disorder prediction 481 511 - -
Sebi192g00062 651 Pfam SWIM zinc finger 367 399 IPR007527 GO:0008270
Sebi192g00062 651 ProSiteProfiles Zinc finger SWIM-type profile. 365 401 IPR007527 GO:0008270
Sebi192g00062 651 Pfam FAR1 DNA-binding domain 64 138 IPR004330 -
Sebi192g00062 651 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi192g00062 Sebi-Chr192 1561560 1564479 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi192g00062 FAR1 3.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi192g00062 - - ccaj:109794121 770.385