Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi192g00052 ATGACACTTCGCTTCCCCATCTTGGATTTCAAGTCCTTACCCTTTGTTAACAACTTGGAGTCTGAGCTACTTGGTGGTGCTGTTGCTCTTCTTGCCGTGGGCCTCACGGCTTACATTTACTATGGCATGAAAAAACCCAAAGGTTGCTTGGACCCCAAAAATTTCAAAGAATTTAAACTTGTGAAGAAGACCCAGCTCAGCCCCAGCGCTGCAAGATTCAGATTTGCCCTCCCTACCCCTTCTTCTGTATTGGGCCTTCCTGTTGGAAAAAACGTACTAGTCAGGGGAAAAGATAGCCAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACGTTGGATTCAGATCTTGGCTACTTTGATTTGGTTGTGAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGGCAAATGAAGGAAGGTGACAACTTGGCCGTGAAGGGCCCCAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCATTTGGAATGCTTGCTGGTGGTTCAGGTATTACCCCAATGTTTCAGCTCATAAGAGCCATACTAGAAAATCCTAAGGACAAAACGAAGTTGTACCTTATTTACGCCAATGTTACAGAGGACGACATTCTGTTGAAGGAAGAACTAGACACCTTTGCAAACAAATATCCTCACAGTTTCCAAGCCTATTATGTTCTTAATAAGCCTCCTAATCAATGGAATGGTGGCGTTGGGTTCATATCAAAGGAGATGATTCAATCCCACTGTCCAGCACCAGCCCCAGATGTCCAGATACTTAGGTGCGGTCCACCACCCATGAATAAAGCCATGGCTACTCACCTTGAAGCACTTGGGTACACATCAAACATGCAGTTCGAGTTCTAA 870 0.4483 MTLRFPILDFKSLPFVNNLESELLGGAVALLAVGLTAYIYYGMKKPKGCLDPKNFKEFKLVKKTQLSPSAARFRFALPTPSSVLGLPVGKNVLVRGKDSQGEEVMRSYTPITLDSDLGYFDLVVKMYPNGKMSHHFRQMKEGDNLAVKGPKGRFSYKPGQVRAFGMLAGGSGITPMFQLIRAILENPKDKTKLYLIYANVTEDDILLKEELDTFANKYPHSFQAYYVLNKPPNQWNGGVGFISKEMIQSHCPAPAPDVQILRCGPPPMNKAMATHLEALGYTSNMQFEF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi192g00052 289 PRINTS Cytochrome B5 reductase signature 203 214 - -
Sebi192g00052 289 PRINTS Cytochrome B5 reductase signature 259 267 - -
Sebi192g00052 289 PRINTS Cytochrome B5 reductase signature 142 156 - -
Sebi192g00052 289 PRINTS Cytochrome B5 reductase signature 165 184 - -
Sebi192g00052 289 PRINTS Cytochrome B5 reductase signature 84 95 - -
Sebi192g00052 289 PRINTS Cytochrome B5 reductase signature 106 113 - -
Sebi192g00052 289 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 259 267 IPR001709 GO:0016491
Sebi192g00052 289 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 203 214 IPR001709 GO:0016491
Sebi192g00052 289 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 165 184 IPR001709 GO:0016491
Sebi192g00052 289 SUPERFAMILY Riboflavin synthase domain-like 46 158 IPR017938 -
Sebi192g00052 289 CDD cyt_b5_reduct_like 58 289 - -
Sebi192g00052 289 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 145 284 IPR039261 -
Sebi192g00052 289 FunFam NADH-cytochrome b5 reductase 48 147 - -
Sebi192g00052 289 FunFam NADH-cytochrome b5 reductase 147 289 - -
Sebi192g00052 289 Gene3D Translation factors 48 148 - -
Sebi192g00052 289 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 53 157 IPR017927 GO:0016491
Sebi192g00052 289 Pfam Oxidoreductase NAD-binding domain 166 272 IPR001433 GO:0016491
Sebi192g00052 289 Pfam Oxidoreductase FAD-binding domain 58 156 IPR008333 -
Sebi192g00052 289 Gene3D - 149 286 IPR039261 -
Sebi192g00052 289 PANTHER NADH-CYTOCHROME B5 REDUCTASE 45 289 IPR001834 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi192g00052 Sebi-Chr192 1269047 1277149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi192g00052 38 289 NADPH P450 reductases AT5G17770 70.238 2.03e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi192g00052 K00326 - gmx:100809584 490.345