Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi192g00051 ATGGGCTCTAAGGTTTACCACCTTCTGATCCCATCTCCAAGGACACCCCAATACCCTAGAGATTTCAGAAATTCTGGATCCAAGCCTGTGAGGTATGGGTCAAAGGGTGTTGATTCTGAAGGTTTCAGCATGTCCCAGAAGGAAATCAGTGATGAGGATGCTAGGTTGGTTTATGTTGATGATCCTCGGAGGACAAACGAGAGGTTTGAATTTGCTGGTAATTCGATTCGTACTGGGAAGTACTCCATCCTCACCTTTCTGCCTAAGAATTTGTTTGAACAGTTTCATAGAGTTGCTTACATTTATTTCCTTATAATTGCCATTCTTAATCAGCTCCCTCAGCTAGCTGTTTTTGGAAGGGGTGTTTCTATTTTGCCATTGGCCTTTGTTCTTCTTGTTACTGCTGTGAAGGATGCATATGAGGACTGGAGAAGGCACAGATCAGACAAAGTTGAGAACAACAGGTTAGCATTTGTTTTGGTTAATGGTGAGTTCCAAGAGAAGAAATGGAAAGATATTAAAGTTGGTGAGATCATTAAAATCAGTGCAAATGAAGCCATTCCTTGTGACTTTGTGTTGCTCTCAACTAGTGACCCTACTGGGGTTGCTTATGTGCAGACTCTTAATCTAGATGGAGAGTCTAATTTGAAGACTAGGTATGCAAAACAAGAGACTCAATCTAAGTTTCATGAAAAGGAGAGGTTCAATGGATTGATTAAGTGTGAGAAACCCAATAGAAATATATATGGGTTTCAGGGTAACATGGAAATTGATGGAAAGAGGTTGTCTCTTGGATCCTCCAATATTGTCCTTAGAGGTTGTGAACTCAAGAACACTCATTGGGCACTTGGTGTTGCTGTGTATTGTGGCTGTGAGACCAAAGCTATGCTCAACAGCTCAGGAGCTCCATCTAAGAGGAGCCGTCTTGAGACTCGGATGAACTCTGAGATCATCATGCTTTCTTTCTTTCTTGTAGCTCTGTGTACAGTTACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGAGTGAGTTGAATCTCTTGCCTTACTATAGGAAACTGGATGTTTCAGAGGGGAAAGAGGAAAGCTATGAATATTATGGATGGGGAATGGAAATCCTTTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATCCCCATATCCTTGTACATTTCTATGGAGCTTGTCCGTGTCGGTCAGGCCTACTTCATGATCAAAGACTCCAGAATGTATGATGAGACAACAAATTCAAAATTCCAGTGCAGGGCCTTGAATATTAATGAAGATTTAGGGCAAATTAAATATGTATTTTCTGACAAAACTGTGGATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAAAGTTAATCCAGAGCTTTTGCAATTAGCAAAAAGTGGATTTTCAAATATAGAGGGAAAACGAATTTATGATTTCTTTCTAGCCCTGGCAGCATGCAATACTATTGTGCCTCTTATTATTGACACATCTGACCCTACAGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAACAAGCATTGGCATATGCTGCTGCTGCCTATGGTTTTATGCTTATAGAGCGAACCTCGGGTTACATAGTCATTGATATTCATGGAGAAAGACACAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGATCGGAAAAGGATGTCAGTTATATTGGGGTACAATGACAACTCTGTGAAACTTTTTGTCAAAGGGGCAGATACATCCATGCTTAGTGTGATAGATAAATCATTGAACACAGACATAATAAAAGCAACTGAAGCCCATCTTCACTCTTATTCTTCCCTGGGTTTGAGGACACTTGTTATTGGGATGCGGGACTTGAATGCTTCAGAATTTGAGCAATGGCACTTTACCTTTGAGGCAGCAAGTACTGCTTTGATTGGTAGGGCTGCTATGCTTCGCAAGGTTGCTATCAATATAGAGAACAATCTCTGCATATTGGGTGCAACTGCTATTGAAGATAAACTGCAGCAAGGTGTGCCAGAATCTATCGAGTCTCTAAGGAGTGCAGGTATTAAAGTATGGGTGTTGACTGGAGACAAACAGGAAACTGCCATATCAATTGGATACTCCTCAAAGCTCCTCACGAGCAACATGACTCAAATTATACTTAAAAGCAACAATAGAGAGTCATGTAGAAGAAGTTTACAAGACGCCCTTGTCATGTCTGAAAAAAACATGGCTCAATCTGCAGTTACCAACTATCCTGAAGGAAGTTCTGATGTTGTTACAACTACAATAGCCTTGATTATTGATGGTACCAGCCTTGTATACATTCTTGACAGTGAACTTGAAGATGAGCTCTTTCAACTTGCAAGTAGATGTTCTGTTGTTCTGTGTTGTCGAGTGGCTCCATTGCAAAAGGCTGGAATTGTTGCCCTAGTGAAGAAAAGGACAGCTGACATGACTCTAGCCATTGGCGATGGGGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGGCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGACACTGGAATTACCAAAGACTGGGCTACATGATACTGTACAATTTTTACAGAAATGCCGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTTCACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGTAGCATGTTGTATTCAATAGTCTACACTGCATTGCCAACTATTGTTGTCGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGTATCCTCAGCTTTACGGGGCTGGGCAGAGACATGAGGCCTACAACAAAAAGTTATTTTGGTTGACAATGGCTGATACTTTGTGGCAAAGCATTGTTGTCTTCTTTGCTCCTCTCTTTGCATATTGGGGAAGCTCTGTAGATGTAGCAAGCATAGGAGATCTTTGGACTCTTTCAGTAGTTATTATGGTTAATTTGCATTTGGCAATGGATGTCATCAGGTGGAATTGGATTATTCATGCAGCCACTTGGGGGTCTGTCATTGCAACTTTCATTTGTGTTATGGTTATTGATGCTATACCGGCATTTCCTGGTTACTGGGCCATCTTTCACACTGCAGGGACTGGACTGTTCTGGCTATGTTTGCTGGGAATTGTGATAGCAGCATTGCTTCCACGTTTTGTTGTAAAATTTGTTTATCAATATTATTTTCCCAATGATATTCAGATTTCAAGAGAAGCTGAGAAGTTTGGGAATGTAAGGGTCAATGAAGGTGGACAGATAGAAATGCATTCCATCTCAGATGGTCCACCAAGATGA 3375 0.4104 MGSKVYHLLIPSPRTPQYPRDFRNSGSKPVRYGSKGVDSEGFSMSQKEISDEDARLVYVDDPRRTNERFEFAGNSIRTGKYSILTFLPKNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLAFVLVNGEFQEKKWKDIKVGEIIKISANEAIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQSKFHEKERFNGLIKCEKPNRNIYGFQGNMEIDGKRLSLGSSNIVLRGCELKNTHWALGVAVYCGCETKAMLNSSGAPSKRSRLETRMNSEIIMLSFFLVALCTVTSVCAAVWLKRHKSELNLLPYYRKLDVSEGKEESYEYYGWGMEILFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIKDSRMYDETTNSKFQCRALNINEDLGQIKYVFSDKTVDGKVLKPKMKVKVNPELLQLAKSGFSNIEGKRIYDFFLALAACNTIVPLIIDTSDPTVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGYIVIDIHGERHRFNVLGLHEFDSDRKRMSVILGYNDNSVKLFVKGADTSMLSVIDKSLNTDIIKATEAHLHSYSSLGLRTLVIGMRDLNASEFEQWHFTFEAASTALIGRAAMLRKVAINIENNLCILGATAIEDKLQQGVPESIESLRSAGIKVWVLTGDKQETAISIGYSSKLLTSNMTQIILKSNNRESCRRSLQDALVMSEKNMAQSAVTNYPEGSSDVVTTTIALIIDGTSLVYILDSELEDELFQLASRCSVVLCCRVAPLQKAGIVALVKKRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSSMLYSIVYTALPTIVVGILDKDLSKRTLLKYPQLYGAGQRHEAYNKKLFWLTMADTLWQSIVVFFAPLFAYWGSSVDVASIGDLWTLSVVIMVNLHLAMDVIRWNWIIHAATWGSVIATFICVMVIDAIPAFPGYWAIFHTAGTGLFWLCLLGIVIAALLPRFVVKFVYQYYFPNDIQISREAEKFGNVRVNEGGQIEMHSISDGPPR 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi192g00051 1124 Gene3D - 128 298 - -
Sebi192g00051 1124 FunFam Phospholipid-transporting ATPase 508 641 - -
Sebi192g00051 1124 FunFam Phospholipid-transporting ATPase 660 863 - -
Sebi192g00051 1124 NCBIfam HAD-IC family P-type ATPase 794 909 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi192g00051 1124 NCBIfam phospholipid-translocating P-type ATPase 456 1098 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi192g00051 1124 NCBIfam phospholipid-translocating P-type ATPase 71 452 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi192g00051 1124 CDD P-type_ATPase_APLT_Dnf-like 73 983 - -
Sebi192g00051 1124 SUPERFAMILY Calcium ATPase, transmembrane domain M 71 1090 IPR023298 -
Sebi192g00051 1124 Gene3D - 507 639 IPR023299 GO:0000166
Sebi192g00051 1124 FunFam Phospholipid-transporting ATPase 129 298 - -
Sebi192g00051 1124 Pfam Phospholipid-translocating P-type ATPase C-terminal 851 1091 IPR032630 -
Sebi192g00051 1124 MobiDBLite consensus disorder prediction 12 41 - -
Sebi192g00051 1124 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 51 1101 - -
Sebi192g00051 1124 Pfam Phospholipid-translocating ATPase N-terminal 57 122 IPR032631 -
Sebi192g00051 1124 Pfam Cation transport ATPase (P-type) 512 588 - -
Sebi192g00051 1124 SUPERFAMILY Calcium ATPase, transduction domain A 154 295 IPR008250 -
Sebi192g00051 1124 SUPERFAMILY HAD-like 655 871 IPR036412 -
Sebi192g00051 1124 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 466 676 IPR023299 GO:0000166
Sebi192g00051 1124 Gene3D - 660 863 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi192g00051 Sebi-Chr192 1249584 1255963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi192g00051 22 1124 Primary Pumps ATPases AT5G04930 69.352 0.0 1662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi192g00051 K14802 - gmx:100784988 1885.15