Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi191g00084 ATGAAAATAGCGAGCAGCCCAACAACGAAGCAGTCTGTTGGCGATCCAAAGACACACATGATCTCACCCTCCCGCCACTTGTTTCGATCTTCAAAAAATCTGCGAAGGAGGAAAACCGCCGCTCGTTCTTCTCGGAACCACCACATCGACCAATATGACATTTCCTCCTCCAATAGTAATAGTCCATACTACAAAGGCCTCACTGATCAATCCCTTGCTATCTTGGACGATGCTCCTACCCCTACCGCTCTTCATTCTCACCACCACACTACTAATTACCTCCTCTCATCTGGCCATAGCCCTTACTACAAAGGTCTTACCGATTATTCCCTTGCTATTGGCCCTCCCACCCCTCCTCATCTTCACAATTACCATCCTTCTTCCGATTCTAGCCCTAGCCCTTACTACAGGGGTCTCATTGATTACTCCCTTGCTCTTCATCCACCTTCATCTCCTACCACTAACTCTTCTATCTTCTCCATCAACTTCTACTCCCGCTTTTACATCAAAGGTCGGGAAGACGAAGAACTCACTGCTCCTCCGTCATCATCCATCCATGCTGATCATGTTGCCTTTCTAATTGAACACAACAACAACAACACTCTGTCAGAAGAAGAAAATAAGATGGAGTTGATGGTTGAAGAGGAGAAGCCTTTGAGGGAGACAGAATCAGATCCAGCAATCGAGGTAATTGAGAGTGTATTAGAAGAAAATTCAGAGAAAACAGTTTTGGAGGAGGAGATGGAATTGATGCCTTGCGATGATGTTGAGTTGGTGATCATTCAAGAGAAGCCATTGAGGGAGAGAGTATCAGAGGCTGAGATTGTATTAGACAAAACAGTTTTAGAGGATGATAATATTGAGATGGTGATTGAAGAGAAGCCATTGAGGGAGACAGATCAGGCAAGTAAGGTTGGGATTAATGCATCATTAGAAGAGAAAACAATTGTGGAGGGAATGACTATTGAAGAGAAGCCATTGAGGGAGAGAGTATCAGAAGAAAGTAATACAGAGAAAACATTAATTGTGGAAGAGATGGATGTTCAAGGGAATAAGGAGGAGGAACTCACTTCTGAAAAGGAGAAGTCCACTGTCTTGTCAGTTTCTGAACAGACAGTTGAATCAGAATTAGGGAATCACAAGTTGAAGGAGGAGAAGGAGAAGAAGGACACAGTTGAGGAAGGAAATGTGTACAAGGAGTATGTTTGGGCAACCAAATACCAACCTGTCACCTTGGAAGACTTCATCTGCAACAGAGATAAAGCCCTTCAGCTTAAAGCATTGGTAAAAGATGGGTGTGCCTGTAATCATTTTATATTTGAAGGGCCACCAAATGCTGGAAAGAGATCCATGATACGGGCTATGCTTCGAGAGGTGTTTGGGGCTGACAAGTGCAGGTAA 1401 0.439 MKIASSPTTKQSVGDPKTHMISPSRHLFRSSKNLRRRKTAARSSRNHHIDQYDISSSNSNSPYYKGLTDQSLAILDDAPTPTALHSHHHTTNYLLSSGHSPYYKGLTDYSLAIGPPTPPHLHNYHPSSDSSPSPYYRGLIDYSLALHPPSSPTTNSSIFSINFYSRFYIKGREDEELTAPPSSSIHADHVAFLIEHNNNNTLSEEENKMELMVEEEKPLRETESDPAIEVIESVLEENSEKTVLEEEMELMPCDDVELVIIQEKPLRERVSEAEIVLDKTVLEDDNIEMVIEEKPLRETDQASKVGINASLEEKTIVEGMTIEEKPLRERVSEESNTEKTLIVEEMDVQGNKEEELTSEKEKSTVLSVSEQTVESELGNHKLKEEKEKKDTVEEGNVYKEYVWATKYQPVTLEDFICNRDKALQLKALVKDGCACNHFIFEGPPNAGKRSMIRAMLREVFGADKCR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi191g00084 466 MobiDBLite consensus disorder prediction 29 43 - -
Sebi191g00084 466 MobiDBLite consensus disorder prediction 1 61 - -
Sebi191g00084 466 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 403 460 - -
Sebi191g00084 466 MobiDBLite consensus disorder prediction 349 377 - -
Sebi191g00084 466 Gene3D - 401 466 IPR027417 -
Sebi191g00084 466 MobiDBLite consensus disorder prediction 1 28 - -
Sebi191g00084 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 461 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi191g00084 Sebi-Chr191 1421020 1422555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi191g00084 402 462 Core DNA Replication Machinery Family AT5G27740 39.344 2.43e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi191g00084 K10756 - gmx:102664389 238.81