Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi191g00082 ATGTTATTCATGGAGATTGATCTTGAGCTGCCTATATGTGAGCATGAGAAGTTTGATATTGAATCTAATGGAAATGATGCTGCCGGTACTGCATGTGATATACATGTTGAGGTGCAAAACAGTAATCCTTCTTCAATGACTGAACACTACAAGGAAGTTTTGAGTGAAAATGCTTTCTGTTACCAGGACCAGGTAGATTTGAATTCCAATCAGGTAGATACTATCGATAAAAATGGCTTTAAAGAGCCACAGAATGGCTTGGAGTTTGAATCAAAGGAGGCTGCCTATTCTTTCTACAGAGAATATGCTCGCACAGTGGGATTTGGTATCACAATAAGAGCCAGTCGACGCTCAAAAAAGTCTGGTAAATTCATTGATATTAAAATTGCTTGTTCCAGGTTTGGAAGCAAGCGTGAGTCTGGTACAAAAGTTAATCCGCGACCATGTATGAAGACAGACTGCAAGGCTGGCATGCACATGAAGAAGAAGCTAGATGGTAACTGGATCATATACAATTTTGTTAAAGAGCACAATCATGAGATCTGTCCAAATGATTTCTTGAGGGGGCGGAGCAAACAAACAAGTAATGTAGCTTGTCAGAAGAAGGGTATGCAATTGGCTCTAGACGAGGGAGATGTGCAGGATGTTTCTTTGGTGGGATTGTCAACAACTGTAAGGTCTGAAAGTACAACCTCATCCTTTGACAAGTATATTCGTGTTGATTCTACCTTTAAGGAGTTTATTGAACAGTATAAAGTTTTCTCTACACACAGTTTTGACATGGAAGCCAAAGCTGACTTTGAGACAAGACAAAGGCAACTTGCATTAAGATCTATATCACCTTTTGAGAAACAGCTATCTACAATTTATACAGATGTCATATTTAGAAAAATTCAGTTGGAGATAGTGGGAGCAGTATCTTGTTGTCTCCGGAAGGAAACAGAAGACAGAACAAATGTAACATTTCTTGTTGATGACTTTGAGGAGAGGAAGAAATTTGTTGTTTCTTGGAACAAGGCAGATTTGGTTGTTTGTTGTTCATGTCATTTATTTCAATACAAAGGCTTTCTATGTAGACATGCAATACTTGTCATTCAGATGTCTGGTATTACCAACATTCCATCCCGTTATATCTTGAAACGATGGACAAAAGATGCAAAGGCCTATCAGTTTGCTGGTGACATAATTAGCAGGGCTGCTAGTCGAGTGCAGCGTTTTAATGACCTTTGTAGGCGGGCAATTATATTAAGTGAAATTGGGTCATTTTGTGAAGATTCTCACCGTATTGCATCTCAGGCACTGGAAGAAGTTTATAAGCATTGTATGAATGCAAACAATTCTACTAGAAGCACTTTAGAGCCCAACAACTTGGCTCTTAATGGTTTTGTTGATGTTGAAGAGAAGAATTATGGCTGCCATAGGACAAAGTCTACTAAGAAAAGGAAGTCATATAATAAAAGGGAACAGAGAATTTCAAGAGCACACAACTTTGATAATTGTTACATTTCTCAACAGGACACGCAAACAGTGCACTTGGATTCTAGAGCTTCAACTCTTGATAGCTATTATGGGGCTCAACAGAATGTTCTTGGAGACGCACAGCTGAACTCAGTTTCTGTCATGCATGACAACGACTATTATAGCAGTCAACAGGCCATTCTGGGGCTGGGGCAAATGCATTCGGTACCGAGCGGTGGTCCACATTATGGGATGCAGCACAGCGTGCAAGGACTGCTTCAGGGACAGCATATTTTCAGAACGCCAACAGTGCACAGATGTTTTGACCTTCAAGATAGTCTATAG 1803 0.3988 MLFMEIDLELPICEHEKFDIESNGNDAAGTACDIHVEVQNSNPSSMTEHYKEVLSENAFCYQDQVDLNSNQVDTIDKNGFKEPQNGLEFESKEAAYSFYREYARTVGFGITIRASRRSKKSGKFIDIKIACSRFGSKRESGTKVNPRPCMKTDCKAGMHMKKKLDGNWIIYNFVKEHNHEICPNDFLRGRSKQTSNVACQKKGMQLALDEGDVQDVSLVGLSTTVRSESTTSSFDKYIRVDSTFKEFIEQYKVFSTHSFDMEAKADFETRQRQLALRSISPFEKQLSTIYTDVIFRKIQLEIVGAVSCCLRKETEDRTNVTFLVDDFEERKKFVVSWNKADLVVCCSCHLFQYKGFLCRHAILVIQMSGITNIPSRYILKRWTKDAKAYQFAGDIISRAASRVQRFNDLCRRAIILSEIGSFCEDSHRIASQALEEVYKHCMNANNSTRSTLEPNNLALNGFVDVEEKNYGCHRTKSTKKRKSYNKREQRISRAHNFDNCYISQQDTQTVHLDSRASTLDSYYGAQQNVLGDAQLNSVSVMHDNDYYSSQQAILGLGQMHSVPSGGPHYGMQHSVQGLLQGQHIFRTPTVHRCFDLQDSL 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi191g00082 600 Pfam SWIM zinc finger 345 367 IPR007527 GO:0008270
Sebi191g00082 600 Pfam FAR1 DNA-binding domain 97 182 IPR004330 -
Sebi191g00082 600 SMART 26again6 344 371 IPR006564 GO:0008270
Sebi191g00082 600 ProSiteProfiles Zinc finger SWIM-type profile. 331 369 IPR007527 GO:0008270
Sebi191g00082 600 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 195 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi191g00082 Sebi-Chr191 1409338 1412413 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi191g00082 FAR1 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi191g00082 - - gmx:100802811 525.783