Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi191g00071 ATGCACAAAACTGACATTGAGTATTCACAATGTGTGTGTGAGCATGAAACAATGGACATCAGTGAAGGAAAAGAGCCCATGGAGGATGTGTGGTTAGAGTTCCTGGATGAGGCTTTGGAGGATCTGGAAATGCTCATCCAACAGTGCGACCACATTATGCCTTCCTTTGATGATGCGCTTCTTCCAACAGCTGCAACAAGTGCAATGGAATACAATGGAAGGTGTGATCAATCACAACGAGTAGCCTCATTAAGTAGGTTTCGGCAAAAGAGGAAAGAGCGATGTTTTCATAGCAAAATTACATCTGGTGATAATGGTGCAATGGAATATCCTGAAAGATATAGTCAAACGGAACGAGCAGCCTCATTAAGTAGGTTCCAGAACAAGAGGAAAGAACGATCCTTTGGTAACAAAGTCAGATATAGTTCACGTCAAGAAGCTGCTCTCAGGGTGCACCGCAGTAAGACTCAAATTATTCTGTCCAAAATGCGAGATGGATCCTATAGTTTGGGGGCTATTCCAGAGTCTCCACAAGATGATATCCACTCAGAAATCTTGTGA 561 0.4296 MHKTDIEYSQCVCEHETMDISEGKEPMEDVWLEFLDEALEDLEMLIQQCDHIMPSFDDALLPTAATSAMEYNGRCDQSQRVASLSRFRQKRKERCFHSKITSGDNGAMEYPERYSQTERAASLSRFQNKRKERSFGNKVRYSSRQEAALRVHRSKTQIILSKMRDGSYSLGAIPESPQDDIHSEIL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi191g00071 186 PANTHER GATA TRANSCRIPTION FACTOR 28 105 184 IPR045280 GO:0006355
Sebi191g00071 186 ProSiteProfiles CCT domain profile. 119 161 IPR010402 GO:0005515
Sebi191g00071 186 Pfam CCT motif 119 156 IPR010402 GO:0005515
Sebi191g00071 186 Pfam Jas motif 79 97 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi191g00071 Sebi-Chr191 1295375 1296304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi191g00071 108 185 Tify Gene Family AT4G24470 52.564 1.45e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi191g00071 CCT 7.9e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi191g00071 - - jre:108988673 89.7373