Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi191g00056 ATGCTTGTTAGTTACGGGAGGGATATTGTCAACCACCACATCCAGATCATAGCTGTTTTGAAATTGAGGCAAAACACAATGATAGTTGGGGGAAGATGTATTTTAGTGGGAATTAGAATTGATAGCCATAGCAAACAGTTGCTCAATTGGGCTCTTGTCAAAGTTGCTGAACCTGGGGACTGTGTTATTGCACTCCACGTAGTTAAAACTCCAGATTATGTTTCCGAGAGCAAGGCCTTGGTTGATGATTATTTAGAGGTTTATGAAGGGTTATGCAATGTGAAAAAGATAGGTCTCTCCAGTGAGGTCTTGACAGGAAGTTCCATTCCAAACATTCTTGTCAACCAGGCAAAAACTCGTGCTGCTGTGGCTCTAGTCCTAGGGGGTAGAGCTTCCACAGCTAGATATTGCGCCAAACGACTACCACCCACCACCAATGTTATTGCTATCCAAGGTGCTAGAATTGTCTTCGGAAGGTGTACTGATAAACAACTAACAGGTTGTCTCATAGAGGATCCTAGACCAAGTCTTATTTGCACAGTGGTCCAATCTGCATTTGGTGAATCCGAGGTGAAGAGTGAGAAATCAACATGCCAAGATAGCACAGAATTGGAGGAAGAAGCATTTGAGGGAGAGCAAAGTTGCAATAAAGCTTTCTCAAGATCAATATCACAGTTTGCAGGTGACTCCACTCAGCAGAAGCTTGGGTGGCCACTTCTCCGTAGGGCCTATACAGATATAACACAGAGCCACGATGCAAGGGACATGTCTGTAGTTCAATGGGTCATGAGCTTACCAGATCGTTCACCACAGAAAAATCCACTCATTTGGGACAATTCATCTGAAAGGGGTATCAGTGACATTGAGAATGAGAGCTATCAAACAGTTTCACCTCCATCACTTGAGCTGCCAAAGTGCTTGGAGGGGATTTTAAACATTAATACATTCAATTGCAAATGGTTCAGCCTTGAGGTTCTTAAGTCTTGTACTGGTCAATTTTCTTCAGAAAATCTGATTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAACCCTCCCTGATGGGAAGGTCATTGCAGTCAAAGTTTTACAGTCATCAAAAGGAGCCTTGAAAGATTTTGCCCGTGAGGTGGAGATAATATCCTCATTGAAGCACAAAGGCATTACCCCTCTACTTGGAATTTGCATTGATGACAGTGCTTTAATCTCTGTTTATGATTATTTCCCCAAAGGTAGCTTAGAGGAAAATCTGAAAGGCAAGAACAAGGGTGGATCTTTCTTGTCATGGGAAGTCAGATTTAATGTAGCTGTTGGGATTGCTGAAGCACTCAATTACCTACACAACCAAACCTCAAAGCCTATTATACACAGAGATGTCAAGTCTTCCAACATTCTTCTTTCCAATGGGTTTGAGCCACAATTATCTGATTTTGGACTTGCTATATGGGGACCAATAACTTCATCTTTTCTAACACAAGACGACGTAGTAGGAACATTTGGTTATCTTGCACCTGAATACTTCATGTATGGAAAGGTGAGTGACAAGATAGACGTCTATGCCTTTGGTGTAGTGCTACTTGAACTAATTTCAGGAAGGGGGCCAATCAGCTCCGGAACTTGCAAAGGACAGGAGAGTTTGGTTATGTGGGCAAAACCATTATTAGAGAGTGGGGATGTTGAAAGCTTACTGGACCCAAATTTGCAAGGGAAGTTTGATGCGGCACAAGTGCAAAAAATGGTTCTGGTAGCATCTCTATGCATTACACGGGCTGCGCGGCTTCGTCCTACATTGAATCAGATACTGAAGATATTAAAAGGATGTGATGAGAAAGTCGAGAACTTGTTTAGCTCCGACGAGAATGATCATGACCATTCGGAAAATCAAGAAAATATTGATGATGAAGTGTATCCAAATTCAAGTGCAGAGTTACACTTGAGCCTTGCATTACTTGATGTTGACAATGACACTACATCATTTAGTAGTATAGAGCATAGCAATAGTGAACATTTGAAAGAACGATGGAGCAGATCATCTAGTTTCAATTAA 2046 0.4189 MLVSYGRDIVNHHIQIIAVLKLRQNTMIVGGRCILVGIRIDSHSKQLLNWALVKVAEPGDCVIALHVVKTPDYVSESKALVDDYLEVYEGLCNVKKIGLSSEVLTGSSIPNILVNQAKTRAAVALVLGGRASTARYCAKRLPPTTNVIAIQGARIVFGRCTDKQLTGCLIEDPRPSLICTVVQSAFGESEVKSEKSTCQDSTELEEEAFEGEQSCNKAFSRSISQFAGDSTQQKLGWPLLRRAYTDITQSHDARDMSVVQWVMSLPDRSPQKNPLIWDNSSERGISDIENESYQTVSPPSLELPKCLEGILNINTFNCKWFSLEVLKSCTGQFSSENLIGKGGSNRVYKGTLPDGKVIAVKVLQSSKGALKDFAREVEIISSLKHKGITPLLGICIDDSALISVYDYFPKGSLEENLKGKNKGGSFLSWEVRFNVAVGIAEALNYLHNQTSKPIIHRDVKSSNILLSNGFEPQLSDFGLAIWGPITSSFLTQDDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGRGPISSGTCKGQESLVMWAKPLLESGDVESLLDPNLQGKFDAAQVQKMVLVASLCITRAARLRPTLNQILKILKGCDEKVENLFSSDENDHDHSENQENIDDEVYPNSSAELHLSLALLDVDNDTTSFSSIEHSNSEHLKERWSRSSSFN 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi191g00056 681 Gene3D Transferase(Phosphotransferase) domain 1 408 634 - -
Sebi191g00056 681 Gene3D Phosphorylase Kinase; domain 1 308 407 - -
Sebi191g00056 681 SUPERFAMILY Protein kinase-like (PK-like) 314 604 IPR011009 -
Sebi191g00056 681 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 33 142 - -
Sebi191g00056 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Sebi191g00056 681 CDD USP_Like 34 142 - -
Sebi191g00056 681 PANTHER OS08G0249100 PROTEIN 194 632 IPR046958 -
Sebi191g00056 681 FunFam Putative receptor-like serine/threonine-protein kinase 408 620 - -
Sebi191g00056 681 SMART serkin_6 333 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi191g00056 681 ProSiteProfiles Protein kinase domain profile. 333 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi191g00056 681 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi191g00056 681 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 302 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi191g00056 Sebi-Chr191 1016185 1019394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi191g00056 320 612 Trihelix Transcription Factor Family AT5G38560 43.000 3.41e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sebi191g00056 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi191g00056 - - gmx:100789189 899.812