Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi191g00025 ATGGACGGCGATGTTGGGCGTTGGTCGTTGGAGTTCATTCTTGGGAAGTCATTCAGAGTCACAGACAGTAACCTAATTAAGAGAATGATTTGCAGTATCCCTCTTTCAGACAACGATTCCTTCCTGAAGAAGGCTATTCTCCTCAAAACCCTTCAAGACGAGTTGTCCACCGTCTCTATTCAAGAGTCCATGCTTGAAATTCTCGAGATCCTGGAGGAAGTCCTTCGTCGCGATGGCTCTCCAATCACCGCCACCATGAGCGCCGCATATTGTGGCGTTGCAGTGGAGTGTACTCTCAAGTATCTGGAACTCGAACTCTCCCACCCTGCCTACATCGACGCCGTCAAGAGGATATGGTCGGATAGGATTTGCTACATGGAGCCTTCACGTTCCGGTGAAGGAAGCCTCTTGTTCTCCGCCGAATTGAACCGTTGGAGAATTGAGATTGAGGCTTCCCTTTCGGACTCGCGAGTCATGAACAGATTATTGCCCAATTCGGTGGCTACCAGTAATAATGTTCCCACTGCTGAAGAATTGGGTGTGAGTGACTTGCCTGTGTCTCCAATAGAAATTCAGAAAGACAATAAGCTGCTTAAAGGCAAGAAGTATACTACTACTGGTATTGAGGAAATGGATCCTTCAACATGTAGCAAAATTGACTCTGTGCCAAGTCATGAAGTCCAAAAGGTTGGGGAATCTCTTGAATGCAATTCTATGGCATTTCACACCTTGACCAAGGATTCTCTGCCCAATTCATTGCATATGACTGATGTTGTAAGATCTAAGTTGGCAGTTAAAGAAATGAATCAGGATCCACCTGTGGAAGAAAACAAGAGTAGTGATGCAGATGTACCTGATCCTCATGCTTGCCAGAGTATTAACAATAATGAGGCTTATCTTAACAAGACAACTTCTGTCCATCACAGTGATGTTCAATGCCCCAGCTTGATGGAACCAAATAGTACTGCTCGTACTCATGAGAGTATTAACAATAATGAGACTAATCTTAACAAGACAACTTCTGTCCGTCAGAGTGATGGTCAACGCCCTAGCTTGATGGAACCAAATTGTACCGCTCGTACTCATGAGTGGGATGAATCGATAGATGGCTTGCAAGGGGAAACATCAAATGATGCAAGAAGATTTCATTTACCTAGCCCAAAGAGGGAGAAACATTCTCCATTGAAGAAGTATGAACCAACAAACATTACAAAAAGGAGAAAAGTAAAAAAATGGAGTGAACTAGAGGAGGAGACGTTAAGGACTGCTGTAAATAAATTTGGCAAAGGAAATTGGAAATGGATCCTCAATTCTTACAGAGATATATTTGAAGATAGAACTGACGTTGATTTGAAGGATAAATGGAGAAATATGTCCCGATATGGAAACAAATGA 1395 0.4301 MDGDVGRWSLEFILGKSFRVTDSNLIKRMICSIPLSDNDSFLKKAILLKTLQDELSTVSIQESMLEILEILEEVLRRDGSPITATMSAAYCGVAVECTLKYLELELSHPAYIDAVKRIWSDRICYMEPSRSGEGSLLFSAELNRWRIEIEASLSDSRVMNRLLPNSVATSNNVPTAEELGVSDLPVSPIEIQKDNKLLKGKKYTTTGIEEMDPSTCSKIDSVPSHEVQKVGESLECNSMAFHTLTKDSLPNSLHMTDVVRSKLAVKEMNQDPPVEENKSSDADVPDPHACQSINNNEAYLNKTTSVHHSDVQCPSLMEPNSTARTHESINNNETNLNKTTSVRQSDGQRPSLMEPNCTARTHEWDESIDGLQGETSNDARRFHLPSPKREKHSPLKKYEPTNITKRRKVKKWSELEEETLRTAVNKFGKGNWKWILNSYRDIFEDRTDVDLKDKWRNMSRYGNK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi191g00025 464 Gene3D - 401 462 - -
Sebi191g00025 464 SMART sant 408 461 IPR001005 -
Sebi191g00025 464 MobiDBLite consensus disorder prediction 326 351 - -
Sebi191g00025 464 PANTHER MYB TRANSCRIPTION FACTOR 333 461 - -
Sebi191g00025 464 SUPERFAMILY Homeodomain-like 411 462 IPR009057 -
Sebi191g00025 464 MobiDBLite consensus disorder prediction 269 283 - -
Sebi191g00025 464 CDD SANT_TRF 410 460 - -
Sebi191g00025 464 Pfam Myb-like DNA-binding domain 410 457 IPR001005 -
Sebi191g00025 464 MobiDBLite consensus disorder prediction 381 397 - -
Sebi191g00025 464 MobiDBLite consensus disorder prediction 369 397 - -
Sebi191g00025 464 ProSiteProfiles Myb-like domain profile. 404 459 IPR001005 -
Sebi191g00025 464 MobiDBLite consensus disorder prediction 267 286 - -
Sebi191g00025 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 404 463 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi191g00025 Sebi-Chr191 563456 566257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi191g00025 372 458 Single Myb Histone (SMH) Gene Family AT1G15720 45.977 1.74e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi191g00025 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi191g00025 - K11111 psat:127081272 379.022