Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00123 ATGGCAACAAATTCAGAGAAAAATTGTGAAGGTGTTGCTGAGTCTCCAGCTTCTACTACTCCACTTGGAAAACAACCAACAGAGGGTGGTGACCCCAAAACTGAAAGAATCAAAGCCACAAGACACCCTCGATGGACCAGACAAGAAACACTTGTTCTCATAGAGGCCAAGAAACTGGTTGAAAATGGAGAACAGGTTTCAAGATACAGATCAGCATCTGGGTTAGTTCACACTGACCCAAAATGGGATTTGGTTTCATCATTGTGTCAGCAACATGGTGTCAATAGAGGGGCTGTTCAGTGCAGAAAAAGATGGGGCAACCTTCTAACTGACTTCAGGAAGATCAAGAAATGGGAATCAAATATAAAAGAGGAGGCAGAGTCATTTTGGATTATGAGAAATGATGTGAGGAAAGAAAAGAAATTGCCAGGGTTCTTTGATGCTGTGGTGTACAATGTGTTGGATGGAGGGAAAATGAGTTGGAGCACTGAAGAGGAAAACTATGACACAGTGACAAATGGGAATAAGGTCAATGGTCCATTGCAAACACCAAGTCCTAACAAAACAGGCATGAGAGGGTGTCTCAAAATGACACCAGTATTACTCACTCTGCCTAGTTCAGGCTGTCAGAGAGAAGCCATGTTCCAAGAGGGGTACAAGAGAAGGAGATCAGCATCAGACAATTGTGAAGACACCACAAATTTCAACGACAATGTTATCAAAGTGCTAAGGAGGAATAGCAACATACTGAAAGCCCACATTGGAGCTCAGAACGTGAATTACCAATTGGCCAGGGACCAGCAGAAGCAGCAAACAGACAGCTTAGTTACAGCACTTGGCAAGCTCACAGATGCTCTCACAAAAATTGCTGACAAGCTGTAA 882 0.4331 MATNSEKNCEGVAESPASTTPLGKQPTEGGDPKTERIKATRHPRWTRQETLVLIEAKKLVENGEQVSRYRSASGLVHTDPKWDLVSSLCQQHGVNRGAVQCRKRWGNLLTDFRKIKKWESNIKEEAESFWIMRNDVRKEKKLPGFFDAVVYNVLDGGKMSWSTEEENYDTVTNGNKVNGPLQTPSPNKTGMRGCLKMTPVLLTLPSSGCQREAMFQEGYKRRRSASDNCEDTTNFNDNVIKVLRRNSNILKAHIGAQNVNYQLARDQQKQQTDSLVTALGKLTDALTKIADKL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00123 293 MobiDBLite consensus disorder prediction 170 190 - -
Sebi190g00123 293 MobiDBLite consensus disorder prediction 170 189 - -
Sebi190g00123 293 Pfam Myb/SANT-like DNA-binding domain 43 132 IPR044822 -
Sebi190g00123 293 ProSiteProfiles Myb-like domain profile. 44 109 IPR001005 -
Sebi190g00123 293 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 18 293 - -
Sebi190g00123 293 SMART sant 41 111 IPR001005 -
Sebi190g00123 293 MobiDBLite consensus disorder prediction 1 39 - -
Sebi190g00123 293 MobiDBLite consensus disorder prediction 1 25 - -
Sebi190g00123 293 Gene3D - 45 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00123 Sebi-Chr190 1593494 1595658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00123 44 117 Trihelix Transcription Factor Family AT5G03680 33.333 3.79e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi190g00123 Myb_DNA-bind_4 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00123 - - tpra:123916032 418.698