Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00120 ATGGCCAAGGAAGGGCTTGGAGAGGCATATGATGGGGATATCGCATTTGTAAGTGCCCTTGAAAATTTTGGAGGAGGGAATGCTGATCCTCATTTTATTGCTTTGGGAGGACCTGTTATGATCAAATTTACTATTGCTTTGAGAGAAATTAGTACATACAAGGAACTTCTTCGGTCACAGGTAGAGCACATGTTCAATGACCGGTTACTACAAATTGTCAATGTTGACATCAATGAAGTCAAGGAAGCTCGTAAGCATTTTGACAAAGCTTCCCTTGTATATGACCAGGCTCGTGAAAAGTTTATGTCACTGAGAAAAAGCACTAAGATTGATATTGCCACTGTCATAGAAGAGGAAATGCAAAATGCAAGAACGTTGTTTGAGGAAGCCCGTTTCAATCTGGTTGGTGCTCTTAATAACATTGAGGTCAAGAAGAGATTTGAGTTTTTAGAGGTTGTCACTGGAGTTATGGATGCTCATCTTCGATACTTTCAACAGGGTTATCAGCTATTACATCAGATGGAACCTTTCATTAACGAGGTTTTGGATTATGTACAACAGTCAAGAGAAAGTTACAACAAGGAGCAGATTTCACTTTATAAAAGAATGCAAGACTACAAAAGACAAGTTTATGAAGAAAGTAGGTTGTCCTTGAATGGCCCTTATGGATCTCCTACTGGAGATTGCGTGCATCCTTTTCCTAAGATATCAAATGAAGTGGCAGATGTAGTAATGGAGTCTGCTGCAAATGGAAAGGTTCAAATCATTCGACAAGGATATCTTTCAAAACGATCCTCCAATTTGAGAGGTGACTGGAAAAGAAGGTATTTTGTTCTTGATAGTCGAGGAATGTTGTACTACTACCGCAAACCATGGAACCTGTCATATGGCAGCAATCAACTATCTCCAAGGAGGAATAGTGCCACTGAAAATGGTTCTGGGCTTCTGAGTCGATGGCTTTCTTCTCATTACCATGGAGGTGTCCACGATGAAAGATCTGTAGCACGTCATACAGTGAACCTGCTCACGTCAACAATCAAGGCTGATGCTGATGATCAGTCAGATTTAAGATTCTGCTTCAGGATTATTTCGCCATCCAAGAACTATACATTGCAGGCAGAAAATGCGGTGGACCAGATGGATTGGATGGAAAAGATAAATGGAGTAATTGCCTCCTTGTTGAGTGCCCAGACACTGGGAACGCCTACCTCAGCTGACTCAGAAAACAGTAACTCTTGCTCTGCCGATAAGAGTAATATGTTAGAAAATTCTCCAGATGATGATCGCACTATGACCGAGAAATCTGAATCCAAGAATTCCACCCCTACTAGCCACTTACGTTCATCTAGAAGTTTGCACTTGCATAATTACAGTATAAGAAGTGAAAAGCCAATTGATATTCTTAGAAGGGTGAGCGGAAATGACAAATGTGCTGATTGTGGGAAACCTGAACCAGACTGGGCATCCTTAAACCTCGGCATCCTTATATGCATTGAATGTTCTGGTGTTCATCGTAATCTTGGCGTACATATATCAAAAGTAAGATCACTGACACTTGATGTGAAAGTCTGGGATCCTTCTGTCTTAAGTATGTTTAAGTCACTTGGCAACCTTTTTGCAAACTCAGTTTGGGAGGAGCTGTTACATTCAACTAGTACTTTGCAAACCGATGACACCCCTGTTGGTTCATCCAAGGCAAACAGAGACAAGCTATCTCATGCAAGAAAACCGAAACATGATGATTCTATTTCATTAAAGGAGAAGTTCATTCACGCAAAGTATTCTGAGAAAATATTCATTCGCCGGACAAAGAAAGACCACCCGCTCCTTTCACTGGCAAAAAAGGTATTGGAAAGCATCTGTGCCAATGACAAAAAAGCAGTGTACGAGCATATTATCAAGTCAGATGCGGATGTCAATGCCATCGGTGGGAAAGCATTATCTGGTGACTGTTTCAACATGGCTTCTTCAAGTAGTTTAAAGTTAAACCTTCAATCGCAAACTGAAAATCAGTTGATTGAGGACATGGGAGATGGTTCTGGTGTGCTTCACTTGGCATGCCTAACTAGTGACGTTGGCATGGTGGAGCTGCTCCTACAGCACGGGGCAGATATAAATGCTTGTGATTCAAGAGGTCAGACACCGCTACATCGCTGCATTATCAGAGGGAAGACTGCAGCTGCAAAAGCGCTTATTATGAGGGGGGCCAATCCACATCTGGCAGATAAAGAAGGCAACACTCCTCTTAAGCTTGCATCAGAATCCGGCTCTGTTGACAAAGAAATTCTTGCTCTCATGGCTAGCAGATAA 2310 0.4177 MAKEGLGEAYDGDIAFVSALENFGGGNADPHFIALGGPVMIKFTIALREISTYKELLRSQVEHMFNDRLLQIVNVDINEVKEARKHFDKASLVYDQAREKFMSLRKSTKIDIATVIEEEMQNARTLFEEARFNLVGALNNIEVKKRFEFLEVVTGVMDAHLRYFQQGYQLLHQMEPFINEVLDYVQQSRESYNKEQISLYKRMQDYKRQVYEESRLSLNGPYGSPTGDCVHPFPKISNEVADVVMESAANGKVQIIRQGYLSKRSSNLRGDWKRRYFVLDSRGMLYYYRKPWNLSYGSNQLSPRRNSATENGSGLLSRWLSSHYHGGVHDERSVARHTVNLLTSTIKADADDQSDLRFCFRIISPSKNYTLQAENAVDQMDWMEKINGVIASLLSAQTLGTPTSADSENSNSCSADKSNMLENSPDDDRTMTEKSESKNSTPTSHLRSSRSLHLHNYSIRSEKPIDILRRVSGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDPSVLSMFKSLGNLFANSVWEELLHSTSTLQTDDTPVGSSKANRDKLSHARKPKHDDSISLKEKFIHAKYSEKIFIRRTKKDHPLLSLAKKVLESICANDKKAVYEHIIKSDADVNAIGGKALSGDCFNMASSSSLKLNLQSQTENQLIEDMGDGSGVLHLACLTSDVGMVELLLQHGADINACDSRGQTPLHRCIIRGKTAAAKALIMRGANPHLADKEGNTPLKLASESGSVDKEILALMASR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00120 769 SUPERFAMILY PH domain-like 165 390 - -
Sebi190g00120 769 ProSiteProfiles Ankyrin repeat region circular profile. 678 709 - -
Sebi190g00120 769 Pfam PH domain 256 390 IPR001849 -
Sebi190g00120 769 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 444 607 - -
Sebi190g00120 769 Gene3D - 605 766 IPR036770 -
Sebi190g00120 769 MobiDBLite consensus disorder prediction 400 450 - -
Sebi190g00120 769 SMART ANK_2a 678 707 IPR002110 GO:0005515
Sebi190g00120 769 SMART ANK_2a 711 740 IPR002110 GO:0005515
Sebi190g00120 769 Gene3D Arf GTPase activating protein 444 604 IPR038508 -
Sebi190g00120 769 CDD ArfGap 465 594 - -
Sebi190g00120 769 SMART 5bar 1 180 IPR004148 GO:0005515|GO:0005737
Sebi190g00120 769 MobiDBLite consensus disorder prediction 555 580 - -
Sebi190g00120 769 Gene3D - 247 402 IPR011993 -
Sebi190g00120 769 SUPERFAMILY ArfGap/RecO-like zinc finger 462 602 IPR037278 -
Sebi190g00120 769 ProSiteProfiles Ankyrin repeat region circular profile. 711 743 - -
Sebi190g00120 769 PANTHER CENTAURIN/ARF 4 767 IPR045258 GO:0005096
Sebi190g00120 769 ProSiteProfiles Ankyrin repeat profile. 678 710 IPR002110 GO:0005515
Sebi190g00120 769 MobiDBLite consensus disorder prediction 400 420 - -
Sebi190g00120 769 Gene3D Arfaptin homology (AH) domain/BAR domain 2 212 IPR027267 -
Sebi190g00120 769 SMART PH_update 255 393 IPR001849 -
Sebi190g00120 769 PRINTS HIV Rev interacting protein signature 474 493 IPR001164 GO:0005096
Sebi190g00120 769 PRINTS HIV Rev interacting protein signature 516 537 IPR001164 GO:0005096
Sebi190g00120 769 PRINTS HIV Rev interacting protein signature 493 510 IPR001164 GO:0005096
Sebi190g00120 769 SUPERFAMILY Ankyrin repeat 617 759 IPR036770 -
Sebi190g00120 769 ProSiteProfiles Ankyrin repeat profile. 711 743 IPR002110 GO:0005515
Sebi190g00120 769 ProSiteProfiles ARF GTPase-activating proteins domain profile. 462 607 IPR001164 GO:0005096
Sebi190g00120 769 SMART arf_gap_3 462 607 IPR001164 GO:0005096
Sebi190g00120 769 MobiDBLite consensus disorder prediction 436 450 - -
Sebi190g00120 769 Pfam Putative GTPase activating protein for Arf 465 601 IPR001164 GO:0005096
Sebi190g00120 769 Pfam BAR domain of APPL family 16 195 IPR004148 GO:0005515|GO:0005737
Sebi190g00120 769 MobiDBLite consensus disorder prediction 421 435 - -
Sebi190g00120 769 CDD PH_ACAP 257 395 - -
Sebi190g00120 769 CDD BAR_SFC_plant 3 177 IPR035670 -
Sebi190g00120 769 ProSiteProfiles PH domain profile. 254 391 IPR001849 -
Sebi190g00120 769 Pfam Ankyrin repeats (many copies) 680 732 IPR002110 GO:0005515
Sebi190g00120 769 SUPERFAMILY BAR/IMD domain-like 10 277 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00120 Sebi-Chr190 1551798 1563513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00120 466 623 C2H2 Transcription Factor Family AT4G21160 38.596 1.90e-22 97.8