Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00115 ATGAACTGGCCAACATGGAAAGCCATGGCAATGACTGTGGTGTTGCTTCAGCTAAGTTTTTCTATGGAAATCTTCTGTCTTTCTTCTCATGCAGATAGAATTGATCTGCTTCCTGGTCAACCCCACATAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACATGAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCAGCTTCAAAGCCTCTGGTCCTCTGGCTCAATGGAGGACCTGGTTGCTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTCAGACCAAATGGGGAAGTTCTGATTAAAAATGAGCATGGTTGGAACATAGAGACAAACATGTTGTATTTGGAGACACCAATTGGAGTGGGGTTCTCTTATGCTAAAGGTAACTCCTCCTATATGACAGTAAATGATGACACAACAGCATTAGAATGGGACAATCTTGTATTCTTGCAACGGTGGTTCAACAAGTTCCCTCAATACAGACACAGAGATTTGTATCTAACAGGAGAAAGTTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATCAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCATTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTAATATCAGATTCTACATACAAAATGTTCACTACAGGCTGTAATTATTCTAAGTATGTTAGTGAATACTATAGAGACTCAGTTTCTCCTCTTTGTTCAAAGGTTATGGGGCAAGTAAACAGAGAAACTAGTAAATTTGTGGATAACTATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAAGTTATTTGTCCTCAAACCCAACAAGGAAATGAGAGTATAGATGTATGTGTAGATGACAAAGTTACAAATTATCTAAACCGAAGAGATGTACAGGAGGCACTTCATGCCAAGCTTGTTGGAGTTCAAAAGTGGGATGTCTGCAGCAACATCCTGGACTATGATATGCTCAACCTGGAAGTACCTACACTCCCTGTTGTTGGATCACTCATAAAAGCTGGAATTCGTGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGAACCTTGGTTCAAAAGCTGGCAAAACAATTAGGACTGAATACAACAGTACCTTACAGAGTATGGTTTGCAGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGCAATGTCCTCTCATTTGCTACCATCAGAGGTGCCTCCCATGAAGCCCCTTTCTCTCAGCCTGAAAGATCACTTGTTCTATTCAAATCATTCTTGGAAGACAGGCCTCTACCTGAAGTTTTCTGA 1404 0.4095 MNWPTWKAMAMTVVLLQLSFSMEIFCLSSHADRIDLLPGQPHIGFQQFSGYVTVDDMKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEHGWNIETNMLYLETPIGVGFSYAKGNSSYMTVNDDTTALEWDNLVFLQRWFNKFPQYRHRDLYLTGESYAGHYVPQLAKLMIEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTTGCNYSKYVSEYYRDSVSPLCSKVMGQVNRETSKFVDNYDVTLDVCISSVLSQSKVICPQTQQGNESIDVCVDDKVTNYLNRRDVQEALHAKLVGVQKWDVCSNILDYDMLNLEVPTLPVVGSLIKAGIRVLIYSGDQDSVIPLTGSRTLVQKLAKQLGLNTTVPYRVWFAGQQVGGWTQVYGNVLSFATIRGASHEAPFSQPERSLVLFKSFLEDRPLPEVF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00115 467 FunFam Carboxypeptidase 27 464 - -
Sebi190g00115 467 Gene3D - 315 351 - -
Sebi190g00115 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Sebi190g00115 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Sebi190g00115 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Sebi190g00115 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Sebi190g00115 467 FunFam Carboxypeptidase 361 460 - -
Sebi190g00115 467 Pfam Serine carboxypeptidase 42 459 IPR001563 GO:0004185|GO:0006508
Sebi190g00115 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 447 IPR001563 GO:0004185|GO:0006508
Sebi190g00115 467 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Sebi190g00115 467 SUPERFAMILY alpha/beta-Hydrolases 40 464 IPR029058 -
Sebi190g00115 467 Gene3D - 361 459 - -
Sebi190g00115 467 Gene3D alpha/beta hydrolase 29 292 IPR029058 -
Sebi190g00115 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00115 Sebi-Chr190 1480750 1483466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00115 323 463 Calmodulin-binding Proteins AT2G22960 28.369 6.34e-16 74.3