Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00097 ATGGATGTAAAGCTAGGAGAACCAACTGTGGTTTTGCCTGCAGAAGAAACAAAAAAGGGTCTCTACTTCCTTTCAAATCTAGACCAGAATATAGCATATCCAGTTCGTACTGTTTACTTTTATAAGTCAGCTTCTAGAGGTAATGAGGATGTTGCACAAGTCATCAAGGATTCCTTATCAAAGATTCTTGTTCACTATTTCCCTATGGCGGGTAGATTGACAATAAGCTCAGAAGGGAAACTGATAGTTGACTGCACAGAGGAGGGTGTTGTATTTGTTGAGGCTGAAGCAAACTGTATGATAGAGGACTTGGGAGATGTGTCAAAGGCAGACCTTGAAACTCTTGGAAAACTGGTCTATGATATCCCTGGTGCAAGGAACATACTCGAGATACCTCCTCTGTTAATTCAGGTGACAAAGTTTAAATGTGGAGGATTTGTTTTGGGAGTAAACGTGAATCATTGCATGAATGATGGTGTAAGTGCTATGCAGTTTGTGAACTCGTGGGGTGAGATAGCTAGAGGCATAGACTTGAAAATTCAACCATTTATGGACAGAACCATACTCAAAGCACGCAACCCTCCTAAAATAGAGTTTCCACACCATGAATTTGCTACAATTGAAGATGTATCAGGTACTGACAAACTTTATGAGGAAGAGTTGCTTTACGGGTCTTTTTGTTTTGATCAGGACAAGCTGGAGATGCTCAAGAAAAAGGCCACAGAAGATGGTGTTATGAAAAAGTGTTCCACTTATGAAGCCCTATCAGCTTTTGTGTGGCGAGCTAGAACTGAAGCCTTAAGGATGCATCCTAATCAACAAGTGAAGCTACTTTTTGCTGTTGATGGAAGGTCTAGATTTGTGTCACCAATGCCAAAAGGGTACTTTGGCAATGCTATTGTGTTGTCAAATGCTCTGTGCAAGGCAGGTGAATTGTTAAAGAACCCATTATCATTTACAGTGGGATTGATTGACAAGGCAATTGACATGGTCACGGATAGTTACATGAGATCTGTTATTGACTATTTTGAAGTTAAAAGAACCAAACCTTCCTTAACAGCAACACTTTTGATTACAACATGGACTAGATTATCTTTCAATGATGCAGATTTCGGCTGGGGGAAGCCTCATTCCTTTGGTCCTGTAAACTTGCCAGAAAAGGAAGTCATTTTGTTTTTATCACATGGTGAAAATGGAAAAGGCATAAATGTGCTCTTGGGTTTGCCAGCTTCTGCCATGAAAAGATTTGAAGCACTAATGGAGATATGA 1269 0.4011 MDVKLGEPTVVLPAEETKKGLYFLSNLDQNIAYPVRTVYFYKSASRGNEDVAQVIKDSLSKILVHYFPMAGRLTISSEGKLIVDCTEEGVVFVEAEANCMIEDLGDVSKADLETLGKLVYDIPGARNILEIPPLLIQVTKFKCGGFVLGVNVNHCMNDGVSAMQFVNSWGEIARGIDLKIQPFMDRTILKARNPPKIEFPHHEFATIEDVSGTDKLYEEELLYGSFCFDQDKLEMLKKKATEDGVMKKCSTYEALSAFVWRARTEALRMHPNQQVKLLFAVDGRSRFVSPMPKGYFGNAIVLSNALCKAGELLKNPLSFTVGLIDKAIDMVTDSYMRSVIDYFEVKRTKPSLTATLLITTWTRLSFNDADFGWGKPHSFGPVNLPEKEVILFLSHGENGKGINVLLGLPASAMKRFEALMEI 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00097 422 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 418 - -
Sebi190g00097 422 FunFam Spermidine hydroxycinnamoyl transferase 1 204 - -
Sebi190g00097 422 Pfam Transferase family 3 421 - -
Sebi190g00097 422 Gene3D - 213 421 IPR023213 -
Sebi190g00097 422 Gene3D - 1 206 IPR023213 -
Sebi190g00097 422 FunFam Tryptamine hydroxycinnamoyl transferase 208 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00097 Sebi-Chr190 1224454 1225872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00097 1 420 Monolignol Biosynthesis Gene Families AT5G48930 37.471 1.21e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00097 K15400 - gmx:100527026 676.396