Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00064 ATGGAAGGAGTTTTGTACTGCAAGGTTCACTTTGAGCAGCTTTTCAAGGAAACCGGCACCTTAACCAAGAAATTTCAATCTGGTGGAAAGCCTAACGAGCTTCCTAGGGCCCCAAGCAAACTTTCTGCCTTCTTCTCTGGGACTCAAGACAAATGTTCATCATGCAAGAAAACAGTATATCCATTAGAAAAGTTGACAGTGGAAGGTGAGTTTTATCACAAGTCATGCTTTAGGTGTACACATGGAGGATGTTACCTCACCCCTTCATCCTACTCTGCTCTTGATGGATATCTATATTGCAAGCCTCACTTCTCTCAGTTGTTCAAGGCAAAAGGTAGCTATAGTTATCTCTCCAAGACAGCTTCAATGAAGAAAAATGAAATGGAACAACAAGCTGTGGAATCAGCACCAGAAGATACAGAGACAGCAGCAAAAGAAGAACAAGAACAGGATGCAGCTGCACTCACACAAGAGTTCCTGATTGATTGGGTGGTGGCTTATGTCATTCGGGAAGAATCCTGCAAAAGTGCTAATCATGTGTTCCATTAA 549 0.4244 MEGVLYCKVHFEQLFKETGTLTKKFQSGGKPNELPRAPSKLSAFFSGTQDKCSSCKKTVYPLEKLTVEGEFYHKSCFRCTHGGCYLTPSSYSALDGYLYCKPHFSQLFKAKGSYSYLSKTASMKKNEMEQQAVESAPEDTETAAKEEQEQDAAALTQEFLIDWVVAYVIREESCKSANHVFH 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00064 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 44 77 - -
Sebi190g00064 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 1 25 - -
Sebi190g00064 182 FunFam LIM domain and actin-binding 1 46 116 - -
Sebi190g00064 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 78 116 - -
Sebi190g00064 182 Pfam LIM domain 52 107 IPR001781 -
Sebi190g00064 182 Gene3D Cysteine Rich Protein 46 116 - -
Sebi190g00064 182 ProSiteProfiles LIM domain profile. 50 110 IPR001781 -
Sebi190g00064 182 SMART lim_4 51 103 IPR001781 -
Sebi190g00064 182 PANTHER OS06G0237300 PROTEIN 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00064 Sebi-Chr190 875330 876457 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi190g00064 LIM 6.8e-11 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00064 - - gmx:100499865 244.202