Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00051 ATGGCATTCTCTGGTGGCTCTGCTCCATATTACATACATAGAGGAGGGATTGCAGGGTCTGCCTCTGGGACACAGACAGGGGGATTGGGGTTTCAAGGACCCCCTGGGTTCAGAGTTTTGCCAAACGCTGGCATTCCAGCTCAGTCAAATGCCCGGGCTCAGGGTGGTTCTGTTGGTTCTAATGCCACATTTTCAGTAGAACCTCAGGTTCGTCCTAGTTATAATCATGACATTAACATTGGTGCCTCTTCTGGGACACCTTCAGCCTCAGTTGAACCTCCTGTGAAAAAGAAAAGAGGGAGACCTCGGAAATATGGTCCTGATGGACCAGTTTCTTTGAGACTGTCTCCAATGTCTGCCCCTGCTAATTCTACCCAGGGTTCAACCACACCTTCTCAGAAACGGGGTAGAGGGCGTCCTCCTGGATCTGGAAGGAAGCAACAGCTAGCTGCATTAGGTGAATGGATGAATAATTCAGCAGGGCTGGCCTTTTCCCCTCATGTTATCACCATTGATGTTGGGGAGGACATTGTAGCAAAGTTATTGTCATTATCACAGCAGAGACCAAGGGCTCTATGCATCATGTCAGCCAATGGGACAGTTTCTAAAGTTACTCTGCGACAGCCTGCTTCTACCATTACCAGTTTTACTTATGAGGGGCGATTTCAAATATTATGCTTGTCTGGTTCCTACTTGGTTGCTGAAGATGGTGGACCCTCCAATAGAACAGGTGGCATAAGTGTTTCCCTTTCTAGCCCGGATGGTCAAGTGATTGGTGGCGGCGCTGCCATGCTTATAGCTGGAAGCTTAGTGCAGGTGGTGGTGTGCAGTTTTGTATATGGTGGCTCCAAGACAAAGACTAAGCAAGGGAGCAGTAGCAAAGATGAAAGTTGTGAGCCTCAGCATAGTGACAAGTTAGCTTCTCCAGCCAGTGCTCCTCCTCCACCTAGTCAAAACTACATGTCTTCTGCAACAGGTGTTTGGCCTGGATCACGACCAGAGCTGAAAAGTGCGCATGCACACACTGGCATTGACTTGACTCGAGGGTGA 1050 0.4895 MAFSGGSAPYYIHRGGIAGSASGTQTGGLGFQGPPGFRVLPNAGIPAQSNARAQGGSVGSNATFSVEPQVRPSYNHDINIGASSGTPSASVEPPVKKKRGRPRKYGPDGPVSLRLSPMSAPANSTQGSTTPSQKRGRGRPPGSGRKQQLAALGEWMNNSAGLAFSPHVITIDVGEDIVAKLLSLSQQRPRALCIMSANGTVSKVTLRQPASTITSFTYEGRFQILCLSGSYLVAEDGGPSNRTGGISVSLSSPDGQVIGGGAAMLIAGSLVQVVVCSFVYGGSKTKTKQGSSSKDESCEPQHSDKLASPASAPPPPSQNYMSSATGVWPGSRPELKSAHAHTGIDLTRG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00051 349 MobiDBLite consensus disorder prediction 15 147 - -
Sebi190g00051 349 Pfam Plants and Prokaryotes Conserved (PCC) domain 166 279 IPR005175 -
Sebi190g00051 349 SUPERFAMILY AF0104/ALDC/Ptd012-like 164 280 - -
Sebi190g00051 349 CDD DUF296 166 278 IPR005175 -
Sebi190g00051 349 Gene3D - 166 293 - -
Sebi190g00051 349 SMART AT_hook_2 96 108 IPR017956 GO:0003677
Sebi190g00051 349 SMART AT_hook_2 134 146 IPR017956 GO:0003677
Sebi190g00051 349 MobiDBLite consensus disorder prediction 117 136 - -
Sebi190g00051 349 ProSiteProfiles PPC domain profile profile. 161 301 IPR005175 -
Sebi190g00051 349 MobiDBLite consensus disorder prediction 47 90 - -
Sebi190g00051 349 MobiDBLite consensus disorder prediction 284 349 - -
Sebi190g00051 349 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 69 316 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00051 Sebi-Chr190 741976 744717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00051 1 349 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 47.781 7.24e-92 278