Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00044 ATGATCATTCCGGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTGTGCTACGCAAAGAAGGATTATAATTTAGCAAAGCACCCAGATATCGATGTGCCAAATCTACAGGTGATTAAGCTGATGCAGAGCTTCAAGTCTAGGGAGTACGTTAGAGAGACCTTTGCTTGGATGAACTACTATTGGTTCCTCACAAACGAAGGCATTGAATTCCTCAGAGGATACCTTAATCTTCCTTCTGAAATTGTTCCTGCTACTCTGAAGAAACAAGCCAAGCCCCCCGGTAGATCATTTGGTGGTCCCGGTGATCGCCCTAGGGATCCACCACGCTTTGAAGGAGAACGGAGATTTGGTGACCGTGATGGGTACCGTGGAGGTCCCCGAGGACCGGGGTGGTGA 411 0.4793 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNEGIEFLRGYLNLPSEIVPATLKKQAKPPGRSFGGPGDRPRDPPRFEGERRFGDRDGYRGGPRGPGW 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00044 136 Gene3D - 1 103 IPR036388 -
Sebi190g00044 136 PANTHER 40S RIBOSOMAL PROTEIN S10 1 132 IPR037447 -
Sebi190g00044 136 MobiDBLite consensus disorder prediction 107 127 - -
Sebi190g00044 136 FunFam 40S ribosomal protein S10 1 104 - -
Sebi190g00044 136 MobiDBLite consensus disorder prediction 93 136 - -
Sebi190g00044 136 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00044 Sebi-Chr190 621893 622562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00044 1 133 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 77.778 6.19e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00044 K02947 K09422 gmx:100803556 192.2