Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00043 ATGTCTGGATGCAATAAATCACCTAAACATAATCAACATTCAATCAAATATTGGGGGATTCAACATGTGGGGGCATCCTTTCAGGCTGATCTTTCTTGTGTGCATTATTCACCTTCTCTTTCCCATAATGAGAATAAGCAAAAGCAATGCTGCAGAAGTTCTCAACAGAAGTCCCCAGAGATACTGAGCACTGCTCAGCTTATCTCTGCAATAGGCCAGATATGGGATTCTGCAAGTCGGCCACTTTCATTTTTGCTCCCGAAGGAAAATGGGAATCAAGATGATAAAGGACTTCCAAAAGAGAAAATTCTGGATAGCATTGATGAGAAAAGGAAAAATGTGGTTACTTCAAATAAGACTAATTACTATCCTGTTAATATGGAGCCTACTGGCTTTGGTTCACAGATTGTGCAGGAAAAATTGCATTTCCCTAAGGTAACACAGAAGATGTTAGTACTTGAATCTTCTAATAAAAGTCAAGATTATATTTATTCTTTATTCCATAGATTTTTGCCGGCCAGTGATAAAAATTCATACAAATATTGGGAAGAAATGGAACTTGGGAGTGAGGAAATCTCATTTAGATCAGGAAATGTGTATTGGTGGATGAGTAGGAATGCTCCTAAAGGGCTAAACTGTCATGCAAAGGTTACTGAGCCTGAGGATCTGAAAACCGTTTCTCAGGTTGCTGGGGGCTGTATTTCAACAGGTACAAGAACCCCTTCATTGGCTGATGAGAGTGATGTGTGCTGTCCTGATTTAGTCATACACGAAGCTCAACAATTATCTAATGATGCCATTCTGGACACAAGAAAAGTTAGCCCTCTGTGTTCAGACTATTTTCTTCAAGCTGTGCCTGATACTAAGGCAGATGTTGGGGCTTGTCAGACCCTAAGTTCTAGTATCTACGCAGACTATCATATCAACTCCTTAGCTGCCTGTAGTAGTGCTTCTGTGCAATGCCAACACAACATTGATGATAATGAATTGCCGGAAATCCAAAGAAAACATTTCTCGGAAATAAGTGATCATGAACCTAAGGTTCAGGTCTTCTCTGAAACCCATCAGAAGCCTTGTCATTTCCTTGCCAAGCAAGAACATGCTTTTTCTGGGGCATTGGCTGGAATATGTGTCAGCCTTTGTCTGCATCCCTTTGACACAATTAAGACAGTCATTCAATCATGCCGAGCAGAACATAGGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTGCCTGCACTATATCGTGGAATTACTACAAACATTGCATCCTCAGCTCCAATTTCTGCAGTTTATACTTTCACCTACGAATCAGTTAAAGCAGCTTTGCTTCCTTACCTTCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACTTCTTTCATTTTTACTCCTAGTGAGCGTATAAAACAGCAGATGCAAGTTAGATCTCATTATCACAATTGCTGGGATGTATTAGTTGGGATTATCAGAAAGGGTGGTTTTTCCTCCCTATATGCAGGTTGGGGAGCTGTGCTGTGCCGGAATATTCCACATTCAATTGTCAAGTTTTACACATATGAAAGCTTGAAGCAAGCGATGCCATCTAATATTCAGTCCAACACGTTTCAAACTTTAGTGTGTGGAGGATTGGCTGGGTCTACCGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGATCTATGAATCAATATGATAGTGTGCTCCATGCCCTTTACAAAATTAGCAAAAGTGAAGGTTTGAAGGGCCTATACAGGGGGTTGACTCCACGGTTGATTATGTACATGTCTCAAGGATCACTGTTCTTTGCTTCATATGAATTTTTCAAGAGGGTATTTTCTCTGGAAGCATCACCTCCCACTGGTTTATACATCCAGGATGATAACAAGAATGTTGAGAACAGAAAAAATTTAGAATTGACAAGTCCATCATTCATCAGGAGTTGCAGCAGTAGCATCCCCAAGCCTTGA 2034 0.4041 MSGCNKSPKHNQHSIKYWGIQHVGASFQADLSCVHYSPSLSHNENKQKQCCRSSQQKSPEILSTAQLISAIGQIWDSASRPLSFLLPKENGNQDDKGLPKEKILDSIDEKRKNVVTSNKTNYYPVNMEPTGFGSQIVQEKLHFPKVTQKMLVLESSNKSQDYIYSLFHRFLPASDKNSYKYWEEMELGSEEISFRSGNVYWWMSRNAPKGLNCHAKVTEPEDLKTVSQVAGGCISTGTRTPSLADESDVCCPDLVIHEAQQLSNDAILDTRKVSPLCSDYFLQAVPDTKADVGACQTLSSSIYADYHINSLAACSSASVQCQHNIDDNELPEIQRKHFSEISDHEPKVQVFSETHQKPCHFLAKQEHAFSGALAGICVSLCLHPFDTIKTVIQSCRAEHRSIFYIGKSIVSDRGLPALYRGITTNIASSAPISAVYTFTYESVKAALLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQVRSHYHNCWDVLVGIIRKGGFSSLYAGWGAVLCRNIPHSIVKFYTYESLKQAMPSNIQSNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSMNQYDSVLHALYKISKSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKRVFSLEASPPTGLYIQDDNKNVENRKNLELTSPSFIRSCSSSIPKP 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00043 677 FunFam Mitochondrial substrate carrier protein-like 488 647 - -
Sebi190g00043 677 ProSiteProfiles Solute carrier (Solcar) repeat profile. 362 446 IPR018108 -
Sebi190g00043 677 ProSiteProfiles Solute carrier (Solcar) repeat profile. 455 538 IPR018108 -
Sebi190g00043 677 SUPERFAMILY Mitochondrial carrier 365 630 IPR023395 -
Sebi190g00043 677 Gene3D Mitochondrial carrier domain 456 674 IPR023395 -
Sebi190g00043 677 Gene3D Mitochondrial carrier domain 348 455 IPR023395 -
Sebi190g00043 677 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 343 638 - -
Sebi190g00043 677 ProSiteProfiles Solute carrier (Solcar) repeat profile. 545 633 IPR018108 -
Sebi190g00043 677 Pfam Mitochondrial carrier protein 366 447 IPR018108 -
Sebi190g00043 677 Pfam Mitochondrial carrier protein 456 539 IPR018108 -
Sebi190g00043 677 Pfam Mitochondrial carrier protein 546 635 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00043 Sebi-Chr190 612567 616533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00043 501 640 Chloroplast and Mitochondria Gene Families AT1G07030 28.571 2.07e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00043 - - gmx:100812271 976.467